Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq577692 279 1e-70 seq3816217 228 2e-55 seq3751544 141 3e-29 seq3172301 105 2e-18 seq3509123 91.5 4e-14 >seq577692 Length=2825 Score = 279 bits (308), Expect = 1e-70 Identities = 475/689 (69%), Gaps = 0/689 (0%) Strand=Plus/Minus Query 36258 ACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGC 36317 ||||||||||| || ||||||||||| || || ||| || ||| || ||||| Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 36318 CCAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAA 36377 |||| |||||||| | | || || || || ||| ||||||||||| | ||| | | Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 36378 GCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGT 36437 || ||||| || || || || || || ||||||||||| || ||||| | | ||| || Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 36438 TCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCA 36497 ||||| || | || |||||||| || || || || ||||| || || || | ||||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 36498 GAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGG 36557 || ||| ||||| || | || || ||||| | ||| || || || || ||||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 36558 GCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGT 36617 || |||||| ||| ||||| || | ||| |||| | |||| |||||||| | Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 36618 CGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCT 36677 || |||| || | || || || || |||||||| ||||| | || || || || Sbjct 511 CGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCCG 452 Query 36678 CCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 36737 |||||||| | ||| || || | |||| ||||||||||| || || ||||| | || Sbjct 451 CCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCCA 392 Query 36738 ATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCT 36797 || || || || || || | || | | ||||||||| || || || | | | Sbjct 391 ATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGAA 332 Query 36798 CCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATT 36857 || || || || || || || || || |||||||| ||||| ||||| ||||| || | Sbjct 331 CCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAAC 272 Query 36858 AAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACA 36917 | ||| | || |||| | | ||||||||| | | |||||||| || ||| Sbjct 271 ACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTACA 212 Query 36918 TAGAGGCGGTTGTTTGTACTTGTAACCCA 36946 || |||||||| || ||| ||| ||||| Sbjct 211 TAAAGGCGGTTATTGGTAGATGTTACCCA 183 >seq3816217 Length=329 Score = 228 bits (252), Expect = 2e-55 Identities = 248/329 (75%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 36120 AAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCC 36179 || ||||| ||||| || || | |||||| | ||| |||| | || ||||||||| || Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 36180 AGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 36239 | |||||| || | ||||| || || || |||||| |||||||| || | || Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 36240 AAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCA 36299 ||||| || ||||| || |||||||| || || ||||||||||| |||||||| || || Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 36300 TAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCG 36359 ||||| |||||||| | | || |||||||| | | || ||||| || | | ||| Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 36360 TGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGA 36419 ||||| || | ||| ||||| ||||||||||| || ||||| || | ||||||||| || Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 36420 TGCATAAGGATATTGTGTTCTGCCTGAAA 36448 ||||| ||||| ||||||||||| || || Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 141 bits (156), Expect = 3e-29 Identities = 199/277 (72%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 36672 GGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGA 36731 || || ||||| || | ||| || || | | | || |||||||| || ||||||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 36732 AGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGT 36791 |||||||| || || || || || || | || ||||||||||||||||| || || | Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 36792 AATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAAT 36851 | | || | || || || || ||||| || || |||||||| || ||||| | ||| Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 36852 GCAATTAAAAATGCTG-TCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCA 36910 || || | | || | | || |||| || | ||||||||| || || || ||||| Sbjct 101 GCGATGATGTA-GCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCA 43 Query 36911 CCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAG 36947 || ||||| ||||||||||| || ||| |||||| Sbjct 42 GCCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAG 6 >seq3172301 Length=157 Score = 105 bits (116), Expect = 2e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 36450 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 36509 || ||||| || |||||||| || || ||||| ||||||||||| || |||||| ||| Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 36510 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 36569 ||||| | ||||||| |||||||| ||| || || |||||||| || |||||| Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCT 120 Query 36570 ACACATATCCACGGCCTCATACC 36592 || || ||||| || | ||| || Sbjct 121 ACGCAGATCCAAGGACGCATTCC 143 >seq3509123 Length=199 Score = 91.5 bits (100), Expect = 4e-14 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 35960 AGACTCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTC 36019 ||||||||||| |||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct 153 AGACTCAGCAGAAGCTAAATCTAAGGGGAAGTTGTGAGCGTTGCGCTCGTGCATTACTTC 94 Query 36020 CATGCCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGA 36079 ||| || | || || ||||| | | |||||||| || || || | ||| |||| Sbjct 93 CATACCCAGGTTAGCGCGGTTGATGACATCAGCCCAGGTGTTAACTACCCGACCGCTGGA 34 Query 36080 ATCAACGACTGACTGATTGAAGTTAAAGCCGTT 36112 || | || || || |||||||| || ||||| Sbjct 33 GTCCATTACGGATTGGTTGAAGTTGAAACCGTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143364484837828