Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq577692 347 4e-91 seq3816217 219 1e-52 seq3751544 178 4e-40 seq3509123 134 4e-27 seq3172301 102 2e-17 >seq577692 Length=2825 Score = 347 bits (384), Expect = 4e-91 Identities = 504/709 (71%), Gaps = 2/709 (0%) Strand=Plus/Minus Query 5480 ACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGC 5539 ||||||||||| |||||||| ||||| || || ||| || ||| || || Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 5540 CCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAA 5599 |||| |||||||| | | ||||| || || ||| || |||||||| | ||| | | Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 5600 GCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGT 5659 || ||||| || || ||||| || || ||||| ||||| || ||||| | | ||| || Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 5660 TCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCA 5719 ||||| || | || |||||||||||||| || ||||| || || || || | ||||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 5720 CTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGT 5779 ||| || || |||| || || ||||| | ||| | || || || || || Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 5780 GCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGG 5839 || ||| || || |||||| || ||||||||||| | ||| |||||||| | Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 5840 CGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCT 5899 || |||| || || || || ||||||||||| || | | ||||| || || Sbjct 511 CGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCCG 452 Query 5900 CCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCA 5959 || || |||||||||||||| | ||| || ||||||||||||||||| ||||| |||||| Sbjct 451 CCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCCA 392 Query 5960 ATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGAT 6019 || || || || ||||||||||| || | | |||||||| || || || | ||||| Sbjct 391 ATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGAA 332 Query 6020 CCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAAT 6079 || | |||||||| || |||||||| || || || || ||||||||||| || ||||| Sbjct 331 CCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAAC 272 Query 6080 ATAAATGCAG-TAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCAC 6138 | ||| ||| | || || |||| | | || ||||| | | ||||||||| || || Sbjct 271 ACAAA-ACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTAC 213 Query 6139 ATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAACTTATCCCAA 6187 ||| |||||||| ||||| || ||||| || |||| |||||| Sbjct 212 ATAAAGGCGGTTATTGGTAGATGTTACCCAAGTGCAAAACTGTTCCCAA 164 >seq3816217 Length=329 Score = 219 bits (242), Expect = 1e-52 Identities = 246/329 (75%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 5342 AAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCC 5401 || ||||| ||||| | || | || ||| | ||| |||| | || ||||||| | || Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 5402 AGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 5461 | |||||| || | |||||| ||||| || |||||| |||||||| || | || Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 5462 AAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCCA 5521 ||||| || ||||| || |||||||| || |||||||| ||||| |||||||| || || Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 5522 TAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCA 5581 ||||| ||||| | | || |||||||| | | |||||||| || | | || Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 5582 TGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGA 5641 ||||| || | ||||||||| ||||||||||| |||||||| || | ||| ||||| || Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 5642 TGCATAAGGATATTGTGTTCTGCCTGGAA 5670 ||||| ||||| ||||||||||| ||||| Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 178 bits (196), Expect = 4e-40 Identities = 207/277 (75%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 5894 GGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGT 5953 || || || ||||| ||||||||||| | ||||||||||||| ||||| |||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 5954 AACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGT 6013 | || || || |||||| || ||||| || || || ||||||||||| || || | Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 6014 AGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAAT 6073 ||||| || || |||||||| || || ||||| ||||| || ||||| ||||| | || Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 6074 GCTAATATAAATGCAG-TAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCA 6132 || | || | |||| | || || |||| || | || ||||| | ||||| ||||| Sbjct 101 GCGATGATGTA-GCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCA 43 Query 6133 CCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAG 6169 || ||||| ||||||||||||||| || |||||| Sbjct 42 GCCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAG 6 >seq3509123 Length=199 Score = 134 bits (148), Expect = 4e-27 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 5183 GACTCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCC 5242 |||||||||| |||| ||| | |||||||||||||| || || ||||||||||||||| Sbjct 152 GACTCAGCAGAAGCTAAATCTAAGGGGAAGTTGTGAGCGTTGCGCTCGTGCATTACTTCC 93 Query 5243 ATACCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAG 5302 ||||| ||||| || ||||| | |||||| ||||| ||| ||| | | |||||| ||| Sbjct 92 ATACCCAGGTTAGCGCGGTTGATGACATCAGCCCAGGTGTTAACTACCCGACCGCTGGAG 33 Query 5303 TCAACGACTGACTGATTGAAGTTAAAGCCGTT 5334 || | || || || |||||||| || ||||| Sbjct 32 TCCATTACGGATTGGTTGAAGTTGAAACCGTT 1 >seq3172301 Length=157 Score = 102 bits (112), Expect = 2e-17 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCC 5731 || ||||| ||||| ||||| || |||||||| ||||||||||| || |||| || Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 5732 TGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790 ||||||| ||||| | || ||||||| | || || || ||||| ||||| || || Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTA-GCAGCCGCAACAGGTGCGCTGTAAGC 119 Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTA 5823 |||||| ||||| || |||||||| || | ||| Sbjct 120 TACGCAGATCCAAGGACGCATTCCCAAGCGGTA 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145456239662652