Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq577692 291 2e-74 seq3816217 233 6e-57 seq3751544 141 3e-29 seq3509123 105 2e-18 seq3172301 105 2e-18 >seq577692 Length=2825 Score = 291 bits (322), Expect = 2e-74 Identities = 478/689 (69%), Gaps = 0/689 (0%) Strand=Plus/Minus Query 25738 ACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGC 25797 ||||||||||| || ||||||||||| || || ||| || ||| || ||||| Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 25798 CCAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAA 25857 |||| |||||||| | | || || || || ||| ||||||||||| | ||| | | Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 25858 GCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGT 25917 || ||||| || || || || || || ||||||||||| || ||||| | | ||| || Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 25918 TCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCA 25977 ||||| || | || |||||||| || || || || ||||| || || || | ||||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 25978 GAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGG 26037 || ||| ||||| || | || || ||||| | ||| || || || || ||||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 26038 GCTGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGT 26097 || |||||| ||| ||||| || | ||| |||| | |||| |||||||| | Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 26098 CGTCCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCA 26157 || |||| || | |||||||| || |||||||| ||||| | || || || || Sbjct 511 CGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCCG 452 Query 26158 CCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 26217 |||||||| | ||| || || | |||| ||||||||||| || || ||||| | || Sbjct 451 CCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCCA 392 Query 26218 ATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCT 26277 || || ||||| || || | || | | ||||||||| || || || | | | Sbjct 391 ATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGAA 332 Query 26278 CCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATT 26337 || || || || || || || || || |||||||| ||||| ||||| ||||| || | Sbjct 331 CCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAAC 272 Query 26338 AAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACA 26397 | ||| | || |||| | | ||||||||| | | |||||||| || ||| Sbjct 271 ACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTACA 212 Query 26398 TAGAGGCGGTTGTTTGTACTTGTAACCCA 26426 || |||||||| || ||| ||| ||||| Sbjct 211 TAAAGGCGGTTATTGGTAGATGTTACCCA 183 >seq3816217 Length=329 Score = 233 bits (258), Expect = 6e-57 Identities = 249/329 (76%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 25600 AAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCC 25659 || ||||| ||||| || || | |||||| | ||| |||| | || ||||||||| || Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 25660 AGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 25719 | |||||| || | |||||| || || || |||||| |||||||| || | || Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 25720 AAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCA 25779 ||||| || ||||| || |||||||| || || ||||||||||| |||||||| || || Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 25780 TAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCG 25839 ||||| |||||||| | | || |||||||| | | || ||||| || | | ||| Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 25840 TGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGA 25899 ||||| || | ||| ||||| ||||||||||| || ||||| || | ||||||||| || Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 25900 TGCATAAGGATATTGTGTTCTGCCTGAAA 25928 ||||| ||||| ||||||||||| || || Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 141 bits (156), Expect = 3e-29 Identities = 199/277 (72%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 26152 GGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGA 26211 || |||||||| || | ||| || || | | | || |||||||| || ||||||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 26212 AGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGT 26271 |||||||| || || || || || || | || || |||||||||||||| || || | Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 26272 AATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAAT 26331 | | || | || || || || ||||| || || |||||||| || ||||| | ||| Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 26332 GCAATTAAAAATGCTG-TCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCA 26390 || || | | || | | || |||| || | ||||||||| || || || ||||| Sbjct 101 GCGATGATGTA-GCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCA 43 Query 26391 CCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAG 26427 || ||||| ||||||||||| || ||| |||||| Sbjct 42 GCCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAG 6 >seq3509123 Length=199 Score = 105 bits (116), Expect = 2e-18 Identities = 132/180 (73%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 25416 AGGTGCTATCAAGGCTAC---CTCTGTAGACTCAGCAGATGCTAAGTCAAGAGGGAAGTT 25472 |||||| | ||| ||||| ||| |||||||||||| ||||| || | |||||||| Sbjct 177 AGGTGCAACCAAAGCTACAGGCTC---AGACTCAGCAGAAGCTAAATCTAAGGGGAAGTT 121 Query 25473 GTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGGCACGGTTAAGAATGTCAGC 25532 ||| ||||| ||||| ||||| |||||||| || | || || ||||| | | ||||| Sbjct 120 GTGAGCGTTGCGCTCGTGCATTACTTCCATACCCAGGTTAGCGCGGTTGATGACATCAGC 61 Query 25533 CCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACTGATTGAAGTTAAAGCCGTT 25592 ||| || || || | ||| |||| || | || || || |||||||| || ||||| Sbjct 60 CCAGGTGTTAACTACCCGACCGCTGGAGTCCATTACGGATTGGTTGAAGTTGAAACCGTT 1 >seq3172301 Length=157 Score = 105 bits (116), Expect = 2e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989 || ||||| || |||||||| || || ||||| ||||||||||| || |||||| ||| Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049 ||||| | ||||||| |||||||| ||| || || |||||||| || |||||| Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCT 120 Query 26050 ACACATATCCACGGCCTCATGCC 26072 || || ||||| || | ||| || Sbjct 121 ACGCAGATCCAAGGACGCATTCC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144831152579432