Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq760737 304 1e-77 seq456579 134 2e-26 seq3830724 113 5e-20 seq3772600 96.9 4e-15 seq3953357 93.3 5e-14 >seq760737 Length=2966 Score = 304 bits (336), Expect = 1e-77 Identities = 608/893 (68%), Gaps = 10/893 (1%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||| || || ||||||| | |||| ||||| || | || ||||| Sbjct 1553 CATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTTC 1494 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 | ||| ||||| |||||||| ||||| || || | | ||| | |||| Sbjct 1493 AATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAACC 1434 Query 36992 TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTT 37051 ||||| ||||| | || || ||||||||||| || | ||| || || | || Sbjct 1433 CAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTATT 1374 Query 37052 TATACCAATTAGTTT-TACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 || ||||| | ||| | | || || | | | || |||| |||||| || || | Sbjct 1373 CATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATC-TTTTTCGATATCGACTG 1315 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATT---TAA 37167 | || ||| || || ||| | |||| | || | |||||| | | ||| Sbjct 1314 CGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTAA 1255 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 ||| | || | |||||| |||||||| ||||| |||||| || ||||| || |||| Sbjct 1254 ACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAA 1195 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 | || | |||||| | || ||||| ||||| | ||||||||| || || || |||||| Sbjct 1194 AAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCAC 1135 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 |||| ||||| ||||| || |||||| || | | || | | ||| ||| ||| Sbjct 1134 AAAAAAAAATGCCTTCTACACATGCAAAAGCGATTA-ACCTCTCTGCAAA--TGAGTTAT 1078 Query 37348 AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 | | |||||| | | |||||| ||||| |||||| || | ||||| | Sbjct 1077 CAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGA 1018 Query 37408 TTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAAC 37467 | || || || ||| | ||||||| || ||| | |||||||| ||||||| || | Sbjct 1017 TCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGC 958 Query 37468 TATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTT 37527 |||||||||| | ||||||||||| || || |||||||| |||||||| || | || Sbjct 957 TATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTT 898 Query 37528 CAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCAC 37587 | | | |||||| ||| ||||| | || ||| ||||| || || | |||| Sbjct 897 CTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCAG 838 Query 37588 TAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT-CATCATTTGATAATTTT 37646 | |||||||||||| | | || || || || ||||||| |||| | | ||||| Sbjct 837 CATTTGCAAAGAAAGCTAATATGTACTTGATGAA-TGTCTTTTCATCTGTAGTTAATTGG 779 Query 37647 TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAAT 37706 | ||| || | | ||| |||| |||||||||||||| ||| |||||||| ||| | Sbjct 778 TACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGT 719 Query 37707 GCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 || ||||||||| ||||||| | || || |||||||||||||| ||||| Sbjct 718 GCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 134 bits (148), Expect = 2e-26 Identities = 392/600 (65%), Gaps = 8/600 (1%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||||||||| || |||||||| ||||| | || || | || || | ||| || || Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 ||||| | || ||||| | ||| ||||| || | ||| ||||| || || || ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 ||||||||||| ||||| || || || || || || | || |||||| | | | Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 |||| |||||| | | ||| || || || ||| || ||| |||||| Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 37407 ATTGCTTTTA--AGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 || ||||| | | | | |||||| | | | ||| || || ||||| || || | Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | |||||||| ||||| || ||||| || |||||||| || ||||| ||| | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| | | || || || || |||||| | || | ||||| ||| ||||| | Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAA 37642 | || | || || || || || | | || |||| | | || | | |||| | Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGA- 616 Query 37643 TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702 ||| ||||| ||||||| | | |||||| ||| | ||||||||| || Sbjct 615 -CTTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGC 557 Query 37703 CAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 | || || || ||||| |||| | ||| | | |||||| || || || || ||||| Sbjct 556 CTCCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 Score = 96.9 bits (106), Expect = 4e-15 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 36871 TCATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTT 36930 ||||||| ||| | ||||| ||||| || |||| | ||||||| ||||| |||| |||| Sbjct 1451 TCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAATTGCTCTTCCCTT 1392 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGG 36961 |||| |||||||| |||||||||||||| || Sbjct 1391 CTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq3830724 Length=343 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 |||| ||||| ||||||||||| || || ||||| || | ||| || | ||| || ||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || ||||| ||||| || |||| |||||| ||||| ||||| || || ||||| || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 37287 GAAAAGAAAATACCTTCAAC 37306 ||||| || | |||||| || Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq3772600 Length=295 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 37251 CtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCT 37310 |||||||| | |||||| || |||||||| || || || ||||| || || || |||||| Sbjct 229 CTTTTTTTCAGCCAAAAGATGGCTGCAAAGGACCCCGAGAAGAAGATGCCCTCTACTGCT 170 Query 37311 GCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTC 37370 ||||| || ||||| || ||| || |||| | | | || ||||||||| ||| | Sbjct 169 GCAAACGCCACAAGTCGCTCACCAAACGTTGCATCCTTAGCACCTATCCATTTTATTGCC 110 Query 37371 CAATCTGCCTTTAATTTAACACA 37393 || ||||| ||| ||| ||||| Sbjct 109 CAGTCTGCTTTTTTTTTCACACA 87 >seq3953357 Length=757 Score = 93.3 bits (102), Expect = 5e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||| ||||| || || || | ||||| || || |||| ||| || | |||||| | Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 || || | | ||||| ||||| ||||| || || ||||||||||||||||| ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 37295 AATACCTTCAACTGCTGCAAATGC 37318 || ||||| || || |||||||| Sbjct 226 GATCCCTTCCACGGCGGCAAATGC 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562935798803280