Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq3637278 100 6e-16 seq3746485 95.1 3e-14 >seq3637278 Length=231 Score = 100 bits (110), Expect = 6e-16 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 284185 TGGGGATGTGGTGAAATTGGCAGACACGCCAGATTTAGGTTCTGGTTCTTC--GGAGTGC 284242 || ||||||||||||||||| | ||||||||||||||||||||||| | | || ||| Sbjct 215 TGCGGATGTGGTGAAATTGGTATACACGCCAGATTTAGGTTCTGGTGCCGCAAGGCGTGA 156 Query 284243 GAGTTCGAGTCTCGCCATCCCCACCAT 284269 ||||||||||||| |||||| |||||| Sbjct 155 GAGTTCGAGTCTCTCCATCCGCACCAT 129 >seq3746485 Length=278 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 324514 TGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAA 324573 |||||||||||||||| |||||||||| |||||||||||| || ||||| |||||||| Sbjct 77 TGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGCGGTTCGAT 18 Query 324574 CCCGTTTAGCTCCAC 324588 |||| ||||||||| Sbjct 17 CCCGCATAGCTCCAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1089242757676436