Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq577692 396 3e-105 seq3816217 279 5e-70 seq3751544 174 2e-38 seq3172301 122 9e-23 seq3509123 109 6e-19 >seq577692 Length=2825 Score = 396 bits (438), Expect = 3e-105 Identities = 497/675 (74%), Gaps = 8/675 (1%) Strand=Plus/Plus Query 162526 AATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCA 162585 || ||| | ||||| |||||||| ||| | ||||||||||| |||||| | || | Sbjct 201 AACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCCTACCTTGCTAACTGCCACC 260 Query 162586 ACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAA 162645 | || || | | || || | || |||||||| || ||||| || || ||| | ||| Sbjct 261 ATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAA 320 Query 162646 CCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGT 162705 || ||| | ||||| || | || || || ||||||||| | | ||||| || || ||| Sbjct 321 CCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCACCGCCGCTGTTGTACCCAGT 380 Query 162706 TCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGG 162765 || ||||| ||||| | ||||| ||||| ||||||||||| |||| | ||||||| ||| Sbjct 381 TCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGCGGCAAATATTGATGAATGG 440 Query 162766 TTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA-GC 162824 | ||||| || || || | ||| | | || ||||||||||| ||||| || || Sbjct 441 CTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGC 500 Query 162825 -ATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTG 162883 ||| || |||||| |||||||||| ||||| || ||||| |||||||||||||| || Sbjct 501 TATA-TG-GGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTG 558 Query 162884 TTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTC 162943 |||| || || || ||| |||| || || || | || || ||| || |||||| Sbjct 559 TTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTC 618 Query 162944 AAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCG 163003 |||||||||| ||||| | | || || || |||||||| || ||||||| ||||| | Sbjct 619 AAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCACATTTAACTTTATGTTAG 678 Query 163004 TGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTG 163063 || | ||||||||||| || | |||||||||||||||||||| | ||||| || |||| Sbjct 679 TGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTG 738 Query 163064 TATTCGGTGGTTCACTCTTTAGT--GCTATGCACGGTTCTCTTGTTACTTCTTCTCTTAT 163121 | || ||||| | |||||| | ||||||||||||||||| || || |||||| | | Sbjct 739 TCTTTGGTGG--CGCTCTTTTCTCAGCTATGCACGGTTCTCTGGTGACATCTTCTTTAGT 796 Query 163122 CAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGA 163181 | ||||| ||||| || || ||| |||||| || |||||||||||||| Sbjct 797 ACGTGAAACCACTGAAATTGAAAGCCAAAACCGGGGTTATCGCTTTGGACAAGAAGAAGA 856 Query 163182 GACTTACAACATTGT 163196 ||||| |||||||| Sbjct 857 AACTTATAACATTGT 871 >seq3816217 Length=329 Score = 279 bits (308), Expect = 5e-70 Identities = 259/329 (79%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 163006 TTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTA 163065 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| || |||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 163066 TTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGA 163125 ||||||||| | | || || |||||||||||| | || |||||||| | | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 163126 GAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACT 163185 ||||| || || || || || ||||||||||| || ||||| ||||||||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 163186 TACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTC 163245 ||||||||||| || ||||| || ||||| |||||| |||||||||| ||||| |||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 163246 AACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTC 163305 |||||| ||||| || ||||||||| | | ||| | || || || ||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 163306 ACTGCAATGGGTGTGTCAACTATGGCATT 163334 || || | ||||| || || ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 174 bits (192), Expect = 2e-38 Identities = 207/281 (74%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561 |||| |||||| || || |||| ||| | ||||| || ||||||||||| ||||| Sbjct 1 TGTAGCTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATG 60 Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621 |||||| | | || | || | | |||| |||||| || || || || || || || Sbjct 61 ATCCCTACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCC 120 Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681 || || || || |||||| | ||||| || || ||||| || | || || ||||||||| Sbjct 121 GTGGACATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATC 180 Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741 ||||||||||| || |||||| || ||||| || ||||| |||||||| || || ||| Sbjct 181 ATCTCTGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGG 240 Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACC 162782 |||||||| | | ||||| ||| | || || ||||| || Sbjct 241 GAAGCAGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 122 bits (134), Expect = 9e-23 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 162850 TCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCA 162909 || |||||||| || ||||||||||||||||| || || ||| ||||| || | || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 162910 GCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCT 162969 || || || |||||| |||| || |||| |||||||||||||| |||| |||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 162970 CTTGGTATTTCTGGTACTTTTAACTACATGTTCGT 163004 || ||||| || || ||||| |||| |||||| || Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq3509123 Length=199 Score = 109 bits (120), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGG 163401 |||||||||||||||||||||||||| | ||| | | ||| || || || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 163402 GCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCAC 163461 || ||| || | ||| | || || ||||||||||| ||||||||||| || |||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 163462 AACTTCCCACTTGACCTTGCTGCTGCTGAGACATCTCAG---GTTGCTCTAACTGCACCT 163518 |||||||| | || | ||| |||||||| ||| || || ||| | ||||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAG---TCTGAGCCTGTAGCTTTGGTTGCACCT 177 Query 163519 TCAATTGGTTAATAAATAGATT 163540 ||| || |||| |||| || Sbjct 178 CAAATCGGCTAATTGATAGCTT 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525649844296080