Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq805419 111 3e-19 seq942746 107 3e-18 seq3953357 89.7 9e-13 >seq805419 Length=1311 Score = 111 bits (122), Expect = 3e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 ||||| |||||||| ||||| |||||||||||||| || |||||||| || ||| Sbjct 1228 CTGGTGGCCTTTGCCGCTGTCGAGGGCATCTTTTTTTCGGGAAGCTTTGCGGCGATATTC 1169 Query 25942 TGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAG 26000 ||||||||| | | | || | | |||| || |||| ||||||||||||||||||| ||| Sbjct 1168 TGGCTCAAGAA-ACGCGGTCTCGTGCCGGGTCTGTCCTTTTCCAACGAGCTCATCTCCAG 1110 Query 26001 GGACGAGGGTCTCCACAGAGATTTTGCCTG 26030 ||||| || | ||| | | |||||||| Sbjct 1109 AGACGATGGCATGCACTGCGGCTTTGCCTG 1080 >seq942746 Length=519 Score = 107 bits (118), Expect = 3e-18 Identities = 131/176 (74%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| | || ||||||||| | | || || | ||| || | |||| || ||| Sbjct 199 TGGGCACTCAACTGGATCAACTCTGACAATGCCACCTATGGTGAAAGAGTGGTTGCTTTT 258 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 |||||||| ||||| ||||| ||| || || ||||| |||||||||||||| ||| || Sbjct 259 GCTGCTGTAGAGGGTATCTTCTTCTCAGGGTCTTTTGCTGCCATCTTCTGGCTAAAGAAG 318 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGG 26008 | ||| ||||| || || ||||| ||||| || ||||||||||| ||||||| Sbjct 319 AGGGGTCTTATGCCTGGTTTG-ACTTTCTCCAATGAACTCATCAGCAGAGACGAGG 373 >seq3953357 Length=757 Score = 89.7 bits (98), Expect = 9e-13 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || ||||| || ||||| || ||||| ||| || || ||||| |||||||||||| || Sbjct 249 GCATTTGCCGCCGTGGAAGGGATCTTCTTCTCTGGATCTTTTGCAGCCATCTTCTGGATC 190 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || ||| |||| | | || || | |||| ||||||| || ||| ||||||||| Sbjct 189 AAAAAGAGAGGGATCCTTCCGGGCATCACCTTTGCCAACGAACTGATCTCCAGGGACGAA 130 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 || || ||| | || ||||| || |||||| Sbjct 129 GGACTGCACTGCGACTTTGCTTG--TGCTCT 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 882770823742080