Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq577692 477 1e-129 seq856283 363 2e-95 seq3816217 327 1e-84 seq3751544 277 2e-69 seq3654882 172 6e-38 seq3172301 140 3e-28 seq658184 113 5e-20 seq3509123 104 2e-17 seq266422 100 3e-16 seq2226574 96.9 4e-15 >seq577692 Length=2825 Score = 477 bits (528), Expect = 1e-129 Identities = 530/707 (75%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 160867 TGGGAACAGTTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTC 160926 |||||||||||||| | ||||| || ||| | |||||||||||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 160927 GGCGTCCTGATGATTCCCTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTT 160986 || | ||||||| || |||||| |||| ||||| ||||| | | || || || Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 160987 GGTGCTCCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTAT 161046 | ||| || |||||||| || |||||||| || |||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 161047 GGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTC 161106 || || ||||||||| | | |||||| | || |||||| || || || ||||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 161107 TACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAA 161166 || |||||||||||||| |||| | | || |||||||| || ||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 161167 CTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTT 161226 | |||| ||||||||||| || ||||| | | || |||||||||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 161227 TCTTACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCA 161286 ||||| || | |||||||||||||||||| || || || |||||||| ||||| Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 161287 GCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCT 161346 |||| || || | | || ||| || |||||||||||||||| ||||||| | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 161347 CTGGGCATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTC 161406 ||||| || ||||| || || |||| ||| | || | ||||||||||| || || | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 161407 ATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCA 161466 |||||||||||||||||||| || ||||| ||||| ||||| || |||| ||| || Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 161467 ATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAG 161526 ||||||||||| ||||| || ||||| | || ||||||||||| |||| || ||| Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 161527 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGT 161573 ||| ||||| || || ||||||||||| || || ||||| || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 363 bits (402), Expect = 2e-95 Identities = 441/601 (73%), Gaps = 0/601 (0%) Strand=Plus/Minus Query 162115 GGTTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTG 162174 ||||||||||||| || |||||||| || | || || ||||| ||||| || ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 162175 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTT 162234 | | || ||||| ||| || ||||| || | ||||| ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 162235 TCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTC 162294 | || || |||||| || |||||||| || |||||||| || || ||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 162295 TTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 162354 | || || || || || || || || | |||| || || || ||| | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 162355 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 162414 |||| || |||| ||||||| | ||||||||||||| | ||||| | ||| |||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 162415 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 162474 | || || || ||||| || ||||| || || ||| || || ||||| ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 162475 GACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCG 162534 | | | || ||||||||||| ||||| || |||||| | || |||||||| || |||| Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 162535 TTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCG 162594 | || || || | || || || ||||| ||||| |||||||| || || || | Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 162595 GGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAA 162654 | || |||| |||||||| || | || ||| ||||||| ||||| ||||||||||| | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 162655 ATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTC 162714 | || || ||||||||||| || || || ||||| |||||||| | |||| |||||||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 162715 A 162715 | Sbjct 480 A 480 Score = 138 bits (152), Expect = 1e-27 Identities = 142/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 162744 GAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAACG 162803 ||||| || ||| | | ||||| || || ||||| |||| || | |||||||| Sbjct 419 GAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAACC 360 Query 162804 TATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAAC 162863 || || ||||| || || |||||||||||||| ||||||||||||||||||||| ||| Sbjct 359 TACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAAC 300 Query 162864 AAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162923 || || ||||| || ||||| ||||| |||||||| || | || || |||| |||| Sbjct 299 AAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTCC 240 Query 162924 ATCGGT 162929 |||||| Sbjct 239 ATCGGT 234 Score = 93.3 bits (102), Expect = 4e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013 |||||||| ||||| || || |||||| | || ||||||||||| ||||||||||| || Sbjct 79 CGTGCTTATGACTTCGTGTCACAAGAATTGCGCGCGGCAGAAGATCCTGAGTTTGAAACC 20 Query 163014 TTCTATACAAAGAACATTC 163032 |||||||| |||||||||| Sbjct 19 TTCTATACTAAGAACATTC 1 >seq3816217 Length=329 Score = 327 bits (362), Expect = 1e-84 Identities = 270/329 (82%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 161383 TTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTG 161442 ||||||||||| |||||||| || |||||||||||||||||| | || || || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 161443 TTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGT 161502 || || ||| || ||||| || ||||||||||| |||| || ||||| |||| ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 161503 GAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 161562 ||||||||||||| ||| || || ||||| |||||||| ||||||||||||||||| ||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 161563 TACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTC 161622 |||||||| || || || ||||| ||||||||||| ||||| |||||||| ||||| ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 161623 AACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTC 161682 |||||| ||| || |||||||||||| | | ||||||||| || | |||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 161683 ACTGCACTGGGCGTAAGCACCATGGCATT 161711 || || | || ||| ||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 277 bits (306), Expect = 2e-69 Identities = 230/281 (82%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 160879 TGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTGATG 160938 |||| |||||| || |||| |||||||||||||||| || |||||||| || |||||| Sbjct 1 TGTAGCTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATG 60 Query 160939 ATTCCCTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCTCCCCCT 160998 || || | | || |||||||||| || | |||||| || || | | ||||||||| Sbjct 61 ATCCCTACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCC 120 Query 160999 GTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATC 161058 |||||||| ||||| || || |||||||| |||||||| || |||| || ||||||||| Sbjct 121 GTGGACATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATC 180 Query 161059 ATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGG 161118 ||||||||||| ||| | ||||| || || || ||||||||||||||||||||||| ||| Sbjct 181 ATCTCTGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGG 240 Query 161119 GAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCC 161159 |||||||| || |||| |||||||||||||||||||| || Sbjct 241 GAAGCAGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 172 bits (190), Expect = 6e-38 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 162744 GAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAACG 162803 ||||| || ||| | | ||||| || ||| ||||| | || || | ||||||||| Sbjct 235 GAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAACC 176 Query 162804 TATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAAC 162863 ||||| ||||| || || |||||||| ||||| || |||||||||||||||||| ||| Sbjct 175 TATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAAC 116 Query 162864 AAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162923 || |||||||| || ||||| ||||| || |||||||| | ||||| |||| |||| Sbjct 115 AAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTCC 56 Query 162924 ATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAG 162978 |||||| | | || || ||| | || || |||||||| ||||| || || |||| Sbjct 55 ATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACAAG 1 >seq3172301 Length=157 Score = 140 bits (154), Expect = 3e-28 Identities = 121/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 161227 TCTTACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCA 161286 || ||||| ||||||||||||||||||| |||||||| ||| || ||||| || || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 161287 GCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCT 161346 || |||||||| ||| || |||| || |||| |||||||||||||| || | |||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 161347 CTGGGCATCTCTGGTACGTTCAACTACATG 161376 ||||| ||||| || || ||||||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq658184 Length=760 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 162115 GGTTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTG 162174 ||||||||||||| || |||||||| || | || || || || || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 162175 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTT 162234 | | || ||||| ||| ||| ||||| || | || || ||||| || || ||||| | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 162235 TCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTA 162274 | || || |||||| ||||||||||| || |||||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 >seq3509123 Length=199 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 161719 AATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAG-GGTAAAGTTATCAACACCTG 161777 || ||||||||||||||||| || | | || ||| ||| || | |||||||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTC-CAGCGGTCGGGTAGTTAACACCTG 59 Query 161778 GGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCA 161837 ||| || || ||||||| ||| || || |||||||| |||||||||||||| ||||| Sbjct 60 GGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCA 119 Query 161838 CAACTTCCCTCTTGACCTTGCTGCTGCTGAGTCCACTCCTGTGGCACTCCAAGCACCTGC 161897 ||||||||| | || | ||| |||||||||| ||||| || | |||||| Sbjct 120 CAACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCTCA 179 Query 161898 AATCGG 161903 |||||| Sbjct 180 AATCGG 185 >seq266422 Length=1885 Score = 100 bits (110), Expect = 3e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 157689 ACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748 ||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||| | Sbjct 1615 ACGGGATGTAGCGCAGCTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAA 1674 Query 157749 ATCCTGTCACCCCGACTT 157766 ||||||||| ||||| || Sbjct 1675 ATCCTGTCATCCCGATTT 1692 >seq2226574 Length=116 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 162632 AGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGG 162691 ||| ||||| |||||||| ||||| || || ||||||||||| || || || ||||| || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 162692 TGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAG 162747 ||||| | || | |||||||||||| | ||||| ||||| || |||| |||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520577008071120