Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq577692 277 5e-70 seq3816217 215 1e-51 seq3751544 132 1e-26 seq3509123 96.9 1e-15 seq3172301 87.8 5e-13 >seq577692 Length=2825 Score = 277 bits (306), Expect = 5e-70 Identities = 477/690 (69%), Gaps = 2/690 (0%) Strand=Plus/Minus Query 18120 ACAATATTATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGC 18179 ||||| ||||| || ||||||||||| ||||| ||| || ||| || |||| Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 18180 TCAGTCGTTTCTC-TAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAA 18238 ||||| ||||| | || ||| || || || || ||| ||||||||||| | ||| | Sbjct 811 TCAGTGGTTTCACGTACTAAA-GAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAG 753 Query 18239 AGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTG 18298 ||| ||||| || || || || || || ||||||||||| || ||||| | | ||| || Sbjct 752 AGCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATG 693 Query 18299 TTCGGCTTGGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATC 18358 || ||||| | || ||||| || || || || || ||| || || || | |||||| Sbjct 692 CTCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATC 633 Query 18359 AGAGAAACTCCCTTGTCCAAAAGGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGG 18418 ||| ||| ||||| || | || |||||| | | ||| | ||||| ||||| || Sbjct 632 AGAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGG 573 Query 18419 TGCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTG 18478 ||| |||||||||| |||||| || ||||| |||| | |||| |||||||| | Sbjct 572 AGCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTC 513 Query 18479 TCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCC 18538 || ||||| || |||||||| || |||||||| ||||| | || || || || Sbjct 512 ACGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCC 453 Query 18539 TCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACC 18598 |||||||| | ||| || || | |||| ||||||||||| || || ||||| | || Sbjct 452 GCCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCC 393 Query 18599 GATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGC 18658 || || ||||| || || | || | | |||||||| || || || | | | Sbjct 392 AATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGA 333 Query 18659 TCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAAT 18718 || || || || || || || || || || || || ||||| ||||| ||||| || | Sbjct 332 ACCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAA 273 Query 18719 CAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCAC 18778 || ||| | | || |||| | | ||||||||| | | |||||||| || || Sbjct 272 CACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTAC 213 Query 18779 GTAGAGGCGGTTGTTTGTACTCGTAACCCA 18808 || |||||||| || ||| || ||||| Sbjct 212 ATAAAGGCGGTTATTGGTAGATGTTACCCA 183 >seq3816217 Length=329 Score = 215 bits (238), Expect = 1e-51 Identities = 245/329 (74%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 17982 AAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCC 18041 || ||||| ||||| | || | || ||| | ||| |||| | || ||||||||| || Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 18042 AAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCA 18101 |||||||| || || | ||| ||||| || |||||| |||||||| || | || Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 18102 AAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCTTCTTGGCCAAATTTATATCCA 18161 ||||| || ||||| || ||||| || || || ||||||||||| || ||||| || || Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 18162 TAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCG 18221 ||||| ||||| || | || || ||||| | | | || ||||| || | | ||| Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 18222 TGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGA 18281 ||||| || | ||| ||||| ||||||||||| || ||||| || | ||||||||| || Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 18282 TGCATAAGGATATTGTGTTCGGCTTGGAA 18310 ||||| ||||| |||||||| |||||||| Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 132 bits (146), Expect = 1e-26 Identities = 197/277 (71%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 18534 GGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGA 18593 || || ||||| || | ||| || || | | | || |||||||| || ||||||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 18594 AGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGT 18653 |||||||| || || || || || || | || || || ||||||||||| || || | Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 18654 AAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAAT 18713 | | || | || || || || ||||| || ||||| ||||| |||||||| | ||| Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 18714 GCAATCAAAAATGCTG-TAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCA 18772 || || | | || | | | || |||| || | ||||||||| || || || ||||| Sbjct 101 GCGATGATGTA-GCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCA 43 Query 18773 CCCCACGTAGAGGCGGTTGTTTGTACTCGTAACCCAG 18809 || || || ||||||||||| || || |||||| Sbjct 42 GCCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAG 6 >seq3509123 Length=199 Score = 96.9 bits (106), Expect = 1e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 17832 GAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGG 17891 ||||||||||||| |||||||| ||||| || ||||||||||| ||||| | || ||| Sbjct 143 GAAGCTAAATCTAAGGGGAAGTTGTGAGCGTTGCGCTCGTGCATTACTTCCATACCCAGG 84 Query 17892 TTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATG 17951 ||||| | ||||| || |||||||| || || || | || | | | | | | Sbjct 83 TTAGCGCGGTTGATGACATCAGCCCAGGTGTTAACTACCCGACCGCTGGAGTCCATTACG 24 Query 17952 GATTGGTTGAAGTTGAATCCATT 17974 ||||||||||||||||| || || Sbjct 23 GATTGGTTGAAGTTGAAACCGTT 1 >seq3172301 Length=157 Score = 87.8 bits (96), Expect = 5e-13 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 18312 ACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCT 18371 || |||||||| |||||||| ||| ||||| ||||||||||| || |||||| ||| Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 18372 TGTCCAAAAGGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCA 18431 ||||| | || || | | ||||||| ||||| || || |||||| ||||| Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCT 120 Query 18432 ACACAAATCCACGGGCGCATACC 18454 || || ||||| || ||||| || Sbjct 121 ACGCAGATCCAAGGACGCATTCC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144187770264508