Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq577692 437 1e-117 seq856283 302 5e-77 seq3751544 260 2e-64 seq3816217 241 2e-58 seq3654882 168 8e-37 seq3172301 149 8e-31 seq3509123 132 6e-26 seq940596 109 7e-19 seq658184 105 8e-18 >seq577692 Length=2825 Score = 437 bits (484), Expect = 1e-117 Identities = 521/707 (74%), Gaps = 0/707 (0%) Strand=Plus/Minus Query 103460 ACGATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTT 103519 || ||||| || || ||||| |||||||| || ||||| |||||| |||| || Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 103520 TCAGTCGTCTCACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGT 103579 ||||| || ||||| || | || || || || || |||||||||||||| ||| || Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 103580 GAACCACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGT 103639 | ||||| ||||| ||||| || |||||||| |||||||||||||| | || ||||| Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 103640 TCGGCTTGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCG 103699 || ||||| | || | ||| |||| || || || ||||| |||| || | | |||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 103700 GAGAACGAACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGA 103759 || || ||||||||||| | | || || || | ||| || | |||||| || |||||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 103760 GCAGAGTATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCA 103819 || || || ||| ||||| || ||||| || | || || |||| |||||||||| Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 103820 CGTCCCATATATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCA 103879 || |||||||| | | ||||| || ||||||||||| || | | ||| | || || Sbjct 511 CGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCCG 452 Query 103880 CCGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCA 103939 |||||||| ||||| ||||||| | ||| |||||||| |||||||| ||||| | ||| Sbjct 451 CCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCCA 392 Query 103940 ATTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAA 103999 || || || || ||| ||||| || | | ||||||||| || ||||||| || ||| Sbjct 391 ATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGAA 332 Query 104000 CCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACG 104059 || | |||||||| || |||||||| ||||| || |||||||| ||||| ||||| | Sbjct 331 CCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAAC 272 Query 104060 ATGAAGCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACA 104119 | || |||||||| || | | || || |||||||||| | ||| |||||||| ||| Sbjct 271 ACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTACA 212 Query 104120 TAGAGACGGTTGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCA 104166 || || ||||| || || ||||| ||||| ||| || | ||||| Sbjct 211 TAAAGGCGGTTATTGGTAGATGTTACCCAAGTGCAAAACTGTTCCCA 165 >seq856283 Length=1080 Score = 302 bits (334), Expect = 5e-77 Identities = 428/602 (71%), Gaps = 0/602 (0%) Strand=Plus/Plus Query 102123 GTGGATTGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGG 102182 ||| || || | || || || || |||||||| || ||||| |||||||| ||||| || Sbjct 479 GTGAATAGCACAGAGTAGCGCACCACCCAGGATGCCGGCAACTCCCATCATGTGGAAGGG 538 Query 102183 GTTGAGCGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAAC 102242 ||||||||||||||| ||||| || || | ||| || | || | || || |||| || Sbjct 539 GTTGAGCGTCCAGTTGTGGAATCCTTGGAAGAATAGGATAAACCGGAAGATGCCTGCTAC 598 Query 102243 ACCAAACGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACT 102302 |||||| ||| ||||||||||| | || || || | || || || | || || || Sbjct 599 ACCAAAGCTGGGAGCAAAGAACCATCCAGATTGACCCAAGGGGTACATTAAGAATACGCT 658 Query 102303 GACAAAAACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAA 102362 || || || || ||||| || | ||| || || ||||| || |||||||| |||| || Sbjct 659 CACGAACACGGCAATAGGGCCGGTGAAAGCGATCGCATTATAAGGACGAATGCCAACCAA 718 Query 102363 CCTAGCCAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGC 102422 || || | || || ||||| || ||| ||||| || || || || || || || || Sbjct 719 CCGGGCGATTTCCAACTGACGCAGGCAGAACCCAATCAGTGCGAAAGCTCCATGCAGGGC 778 Query 102423 CACAAAAGCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGG 102482 ||||||||||| | ||||| | |||| ||| | | || || | |||||||| || Sbjct 779 TACAAAAGCCCATAAACCCCCTAATTGGCACCAGCGGGTAAAGTCCCACTGAGCTTCGGG 838 Query 102483 ACCCCAAAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGT 102542 |||||| || | || || || || |||| | || ||| || || || ||||| || Sbjct 839 ACCCCACAGGAACAGTAGGGAGTGCCCCAAACTGTTAGCGGGGGTGCTGACGGCAGCGGT 898 Query 102543 AAGGAAATTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGC 102602 || || || |||||| ||||| | || || |||||||| ||||| || ||| | Sbjct 899 CAGAAAGTTGCAACCTTCTAGGTAGGAACTGGCGAGTCCGTGGGTGTACCAAGAGGTAAC 958 Query 102603 AAACGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAG 102662 ||| || || || || | ||| ||||| || | ||||| || ||| ||||| || | Sbjct 959 AAAGGTGGTTCCTGTCAACCATCCCCCGATAGATAGATAGGCGCAGGGGAAAAGCAGGAT 1018 Query 102663 TCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722 || ||||| |||||||| || || ||||| || || | ||||||||| |||| ||||| Sbjct 1019 ACCCGACCATCCCACAAATACGAACCGATCGCGCTTCAGCCAGTCATCGAGGACATCAAA 1078 Query 102723 CC 102724 || Sbjct 1079 CC 1080 Score = 125 bits (138), Expect = 9e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 101895 AGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAGAGCAT 101954 ||| ||||| | | ||||||||||| ||||||| || | ||||||||||| ||||| Sbjct 219 AGCTAGACCTACTACACCGATGGAACACATCCACAGCCCTGTTACAGGAACAAACAGCAT 278 Query 101955 AAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAGAAACG 102014 ||||| || ||||| | || || ||| |||||||| || || || |||||||| || Sbjct 279 GAAGAAGTGTAACCAGCGTTTGTTGGAAAAAGCAATACCGAAAATCTGGGACCAGAAGCG 338 Query 102015 GTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGT 102074 ||| ||||| ||||| || || || ||||| |||| |||| || || || ||| || Sbjct 339 GTTAGCTGTCACCATGGAGTAGGTTTCTTCGGCTTGGGTGGGTTCAAAAGCACGGAAGGT 398 Query 102075 GTTTGCTTGATCACCATCTTCA 102096 ||| | | || || |||||| Sbjct 399 GTTAGATCCTTCTCCGTCTTCA 420 >seq3751544 Length=281 Score = 260 bits (288), Expect = 2e-64 Identities = 225/276 (82%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 103874 GGACCACCGTTATACAGCCACTCATCAAGAGATG-CTGCTTCCCAAATGGGATAGAAGTG 103932 || |||||||| || ||||| ||||| | || || |||||||||||||||| |||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCA-AGCTGGCTGCTTCCCAAATGGGGTAGAAGTG 223 Query 103933 AAGACCAATTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACAT 103992 ||||| || || |||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct 222 CAGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAA 163 Query 103993 GAGTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAA 104052 || |||||||| |||||||| || || ||||| || || ||||| || || || | || Sbjct 162 CAGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAA 103 Query 104053 AGCAACGATGAAGCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCA 104112 ||| | |||| |||||||||| || | | || || ||||||||||| ||||||||||| Sbjct 102 AGCGATGATGTAGCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCA 43 Query 104113 ACCAACATAGAGACGGTTGTTTGTCGATGTAACCCA 104148 || ||||| || |||||||| || ||||| ||||| Sbjct 42 GCCTACATAAAGGCGGTTGTTGGTGGATGTTACCCA 7 >seq3816217 Length=329 Score = 241 bits (266), Expect = 2e-58 Identities = 201/246 (82%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 103405 GTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGAT 103464 ||||||||| || || ||||||||||||| |||||||||||||| ||||| || || || Sbjct 246 GTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCGAAGTAACCGTGAGCTGCCACAAT 187 Query 103465 GTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGT 103524 |||||| || ||||| ||||| ||||| |||||||| |||||||||||||| |||| || Sbjct 186 GTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCGTAGTTTTGAGATTCGATTTCGGT 127 Query 103525 CGTCTCACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACC 103584 || ||||| |||| || || || || | ||||||||||| || ||||| | ||| Sbjct 126 GGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCGTGCATCGCGGAGAACAAAGCACC 67 Query 103585 ACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGC 103644 |||||| || |||||||| |||| ||| |||||||||||||| || ||||| ||||| || Sbjct 66 ACCGAATACACCAGCAACTCCCAACATATGGAAGGGGTGCATCAGGATGTTGTGTTCTGC 7 Query 103645 TTGGAA 103650 |||||| Sbjct 6 TTGGAA 1 >seq3654882 Length=237 Score = 168 bits (186), Expect = 8e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 101861 CTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAAC 101920 |||| || || |||||||||||||| ||||| | ||| ||||| | | ||||||||||| Sbjct 1 CTTGTGACACGAAGTCATAAGCACGCAGGTTTACAGCTAGACCCACTACACCGATGGAAC 60 Query 101921 TTGTCCACAGACCCATAACAGGAACAAAGAGCATAAAGAAATGCAACCACCTCTTATTAC 101980 |||||||||| | || ||||| || ||||| ||||| || ||||| | || || Sbjct 61 ACATCCACAGACCTGTTACGGGAACGAACAGCATGAAGAAGTGTAACCAACGTTTGTTTG 120 Query 101981 TAAATGCAATACCAAAGATTTGAGACCAGAAACGGTTTGCTGTAACCATTGAATAAGTCT 102040 ||| |||||||| || ||||||||||| || ||||| ||||| ||||| ||||| || | Sbjct 121 AAAAAGCAATACCGAAAATTTGAGACCAAAAGCGGTTGGCTGTCACCATGGAATAGGTTT 180 Query 102041 CTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCA 102096 ||||| |||| || | || || ||| ||| ||||| | | || || |||||| Sbjct 181 CTTCCGCTTGGGTCGGTTCAAAGGCTCGGAAGGTGTTAGATCCTTCTCCGTCTTCA 236 >seq3172301 Length=157 Score = 149 bits (164), Expect = 8e-31 Identities = 126/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 103652 ACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACCT 103711 |||| |||| ||||||| ||||| || ||||||| ||||||| | |||||||| |||||| Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 103712 TGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCG 103771 || || | |||||||| |||||||||||| |||||||||||||| || ||| || Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCT 120 Query 103772 ACACAGATCCAGGGGCGCATGCCCAGACGGTAGGA 103806 || |||||||| || ||||| |||| |||||||| Sbjct 121 ACGCAGATCCAAGGACGCATTCCCAAGCGGTAGGA 155 >seq3509123 Length=199 Score = 132 bits (146), Expect = 6e-26 Identities = 125/157 (80%), Gaps = 8/157 (5%) Strand=Plus/Minus Query 103162 AGACTCTGCAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTC 103221 |||||| |||| ||| | || | |||||||||||||||||| ||||||||||| ||||| Sbjct 153 AGACTCAGCAGAAGCTAAATCTAAGGGGAAGTTGTGAGCGTTGCGCTCGTGCATTACTTC 94 Query 103222 CATACCCAGACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACC-CT--- 103277 ||||||||| ||||||||||| || || ||||||||||| | || ||||| || Sbjct 93 CATACCCAGGTTAGCGCGGTTGATGACATCAGCCCAGGTGTTAACTACCCGACCGCTGGA 34 Query 103278 GACCATCAAGGATGGACTGGTTGAAGTTGAATCCGTT 103314 | |||| | |||| |||||||||||||| ||||| Sbjct 33 GTCCATTACGGAT----TGGTTGAAGTTGAAACCGTT 1 >seq940596 Length=2461 Score = 109 bits (120), Expect = 7e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 102775 TTAGTAGAGTGATTCTTCTTGTTCTGTCAGGACTACCACATCCGAAGTTGGGTATGCCAC 102834 |||||||||| ||||||||| | || || | || || || || || || || Sbjct 1155 TTAGTAGAGTCCTTCTTCTTGGTGAGTTTTGATTGTGCAGTCGGAGGTGGGATAGGCTAC 1214 Query 102835 GCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATCCAGAAAGGATTGATCTTCTTG 102894 || |||| |||| | || ||||| | ||||| ||||| | || || ||||| || Sbjct 1215 ACAAGTCAAAACATACCCAGCTTCGATCTGATCATCATCTAAGAAAGACTGATCAGACTG 1274 Query 102895 ATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGAACACGCACCAGCACGACAGGA 102954 || | ||||| || |||||||||| || || || ||||||||||| ||||| Sbjct 1275 GTCAATGGTACCACTGGTGATTGTACCAGCACAGGTGGAGCAAGCACCAGCACGGCAGGA 1334 Query 102955 ATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAGAATATATTGATCATCCTCACA 103014 || |||||||| | || ||||| || ||||| || ||||||||| |||||| || || Sbjct 1335 GTAGGGCAGATCTAGTCCAGCTTCTTCGGCAGCATCGAGAATATATGTATCATCATCGCA 1394 >seq658184 Length=760 Score = 105 bits (116), Expect = 8e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 102574 GCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTCGTGCCAGTAAGCCAGCCCCCAATT 102633 || || ||||| || ||||| || ||| |||| || || || || ||||| || || || Sbjct 12 GCGAGTCCGTGAGTGTACCAAGAGGTAACAAAGGTAGTTCCGGTGAGCCATCCGCCGATA 71 Query 102634 GCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAAGACAAAGCGATCT 102693 | ||||| ||| ||| ||||| || | |||||||| || || || ||||||||||| Sbjct 72 GATAGATAGGCACAGGGGAAAAGCAGGATACCAGACCATCCTACGAATACAAAGCGATCA 131 Query 102694 CGTTTAATCCAGTCATCCAGGATGTCAAACC 102724 || || | ||||||||| |||| ||||||| Sbjct 132 CGCTTCAGCCAGTCATCGAGGACATCAAACC 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602089092304560