Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq577692 367 4e-97 seq3751544 196 1e-45 seq3816217 183 8e-42 >seq577692 Length=2825 Score = 367 bits (406), Expect = 4e-97 Identities = 509/713 (71%), Gaps = 0/713 (0%) Strand=Plus/Minus Query 21756 ACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCT 21815 ||||| || ||||| ||||| ||||| ||||| ||||| ||| || | | Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 21816 TCAGTCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAA 21875 ||||| || ||||| | | || || || ||||| |||||||||||| ||||| | | Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 21876 CTCCCACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGC 21935 |||||||| || || || || |||||||| || || || ||||| | || ||| ||| Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 21936 TCAGCCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCA 21995 || || || | ||| | ||| |||| || ||||| || ||||||| || | | ||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 21996 GAAAAAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGA 22055 |||||||| || || || | | |||||| | | || || |||||||| || |||||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 22056 GCAGAGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCT 22115 || || |||||| ||||| || | ||| |||| ||||| ||||||||||| Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 22116 CGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCG 22175 || ||||| || ||| | ||| || ||||||||||| || | | ||| | || ||| Sbjct 511 CGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCCG 452 Query 22176 CCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCG 22235 ||||| || ||||||||||||| | || |||||||| || || || ||||| | || Sbjct 451 CCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCCA 392 Query 22236 ATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAG 22295 || |||||| || || || || || | | |||||||| || || |||||||| || Sbjct 391 ATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGAA 332 Query 22296 CCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATA 22355 || | |||||||| ||||| || || || || ||||| ||||| | ||||| || | Sbjct 331 CCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAAC 272 Query 22356 ATAAAACAAGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACA 22415 | |||||| | || || | || | | || ||||| | | || ||||| |||||| Sbjct 271 ACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTACA 212 Query 22416 TAAAGACGGTTATTAGTAGAGGTGACCCAGGAACAAAACTGCTCCCAGGCATT 22468 ||||| |||||||| ||||| || ||||| | |||||||| ||||| |||| Sbjct 211 TAAAGGCGGTTATTGGTAGATGTTACCCAAGTGCAAAACTGTTCCCAAACATT 159 >seq3751544 Length=281 Score = 196 bits (216), Expect = 1e-45 Identities = 209/276 (76%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 22170 GGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGT 22229 || || |||||||| ||||||||||| | | || ||||||||||| ||||||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 22230 AGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAAC 22289 || ||||| ||||| | ||||| || || || || ||||||||||| || |||||| Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 22290 AGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAG 22349 || || ||||| |||||||| ||||| || || ||||| || || || || | | ||| Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 22350 GCGATAATAAAACAAGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAACCAT 22409 ||||| || | || | ||||| | || ||| || ||||| || || |||||||| Sbjct 101 GCGATGATGTAGCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCAG 42 Query 22410 CCTACATAAAGACGGTTATTAGTAGAGGTGACCCAG 22445 ||||||||||| ||||| || || || || |||||| Sbjct 41 CCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAG 6 >seq3816217 Length=329 Score = 183 bits (202), Expect = 8e-42 Identities = 238/329 (72%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 21618 AAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCA 21677 || |||||||| || || || | || | ||||| || || | || ||||| ||| | Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 21678 AGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCA 21737 | ||||| || || |||| || || || ||||||||||||||| || ||||| Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 21738 AAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCA 21797 || || |||||||| || ||||| ||||| || ||||| |||||||| || |||||||| Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 21798 TAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCG 21857 ||||| || || | ||| || || ||||| | | || || || |||| |||| Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 21858 TGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGA 21917 ||||| || ||||||||| ||||| ||||| || || || |||| ||| || || || Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 21918 TGCATAAGAATATTGTGCTCAGCCTGGAA 21946 ||||| || || ||||| || || ||||| Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139318189425960