Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq577692 410 1e-109 seq3751544 199 5e-46 seq3816217 176 5e-39 seq3172301 107 2e-18 >seq577692 Length=2825 Score = 410 bits (454), Expect = 1e-109 Identities = 511/700 (73%), Gaps = 0/700 (0%) Strand=Plus/Minus Query 8176 ACAATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCT 8235 ||||| ||||| || ||||||||||| ||||| |||||| ||| || || | Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 8236 TCAGTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGT 8295 ||||| || || | | || ||||||||| || | ||||||||||||||| ||| || Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 8296 GATCCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGC 8355 | ||||| || | ||| ||||| || ||||||||| || ||||| | || |||||| Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 8356 TCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCA 8415 |||||||| | || ||||| |||||||| || |||||||| || || || | |||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 8416 GAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGA 8475 || || ||||| ||||| | | ||| ||||| | || || ||||||| ||| ||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 8476 GCACTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGT 8535 || ||||| || ||| ||||| || | ||| ||||| || || || | ||||||| Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 8536 CTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCT 8595 | |||||| || | |||| || || ||||||||||| | || |||||| || || || Sbjct 511 CGACCCATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGCCG 452 Query 8596 CCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCA 8655 |||||||| | ||| ||||| | | || |||||||| |||||||| ||||| || ||| Sbjct 451 CCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACCCA 392 Query 8656 ATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAA 8715 || || || ||| || || ||||| | | ||||||||| || || |||| | ||| Sbjct 391 ATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAGAA 332 Query 8716 CCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACG 8775 || | ||| ||||| || || ||||| ||||| ||||| || ||||| | ||| || | Sbjct 331 CCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTAAC 272 Query 8776 ATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACA 8835 | ||| || | | |||| || |||| ||| ||||| | || ||||||||||| ||| Sbjct 271 ACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTACA 212 Query 8836 TAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAACT 8875 ||||| | ||| || ||| ||| ||||| |||||||| Sbjct 211 TAAAGGCGGTTATTGGTAGATGTTACCCAAGTGCAAAACT 172 >seq3751544 Length=281 Score = 199 bits (220), Expect = 5e-46 Identities = 209/275 (76%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 8590 GGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGT 8649 || || ||||| || | ||| ||||| || |||| |||||||||||||| |||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 8650 AATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATG 8709 | || || || ||||| || ||||| || |||||||||||||||||||| || |||| Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 8710 AATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAAT 8769 | ||||| || || ||||| || |||||||| || || || || |||||||| ||||| Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 8770 GCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAA 8829 || | ||| |||| | | ||||| || | | ||| ||||| ||||| || ||||| Sbjct 101 GCGATGATGTAGCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCAG 42 Query 8830 CCGACATAAAGTCTGTTGTTTGTACTTGTAACCCA 8864 || |||||||| | |||||| || ||| ||||| Sbjct 41 CCTACATAAAGGCGGTTGTTGGTGGATGTTACCCA 7 >seq3816217 Length=329 Score = 176 bits (194), Expect = 5e-39 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 8100 GAAGAAGTGAAGACTTCTACTGTTGTTAAACGATGCATACTGGAAGATTAATCTACCAAA 8159 ||||||||| || | |||||||| || || ||||| |||||||| | | ||| || Sbjct 267 GAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCGAA 208 Query 8160 GTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATA 8219 ||| || ||||| || ||||| || ||||| |||||||||||||| || || ||||| || Sbjct 207 GTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCGTA 148 Query 8220 GTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTG 8279 ||| ||||| || ||| || || || | | | ||||| || || ||||||||||| Sbjct 147 GTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCGTG 88 Query 8280 CATAGCACTGAAGAGTGATCCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATG 8339 ||| || ||| | | |||||||| | ||| || || || ||||||||| || || Sbjct 87 CATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGGTG 28 Query 8340 CATAAGAATGTTATGCTCTGCTTGGAA 8366 ||| || ||||| || ||||||||||| Sbjct 27 CATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3172301 Length=157 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 8368 ACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCC 8427 || ||||||||||| || || || || ||||| |||||||| || || ||||| ||||| Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 8428 TGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCT 8487 || || | || || | ||||| ||||| |||||| | || || || || || ||| Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCT 120 Query 8488 ACACAGATCCATGGTCTCATACCTAAGCGGTATGATA 8524 || |||||||| || | ||| || |||||||| |||| Sbjct 121 ACGCAGATCCAAGGACGCATTCCCAAGCGGTAGGATA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585313454045040