Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq577692 468 5e-127 seq856283 338 7e-88 seq3816217 309 3e-79 seq3751544 251 8e-62 seq658184 129 6e-25 seq3509123 127 2e-24 seq3654882 125 8e-24 seq3172301 122 9e-23 seq2226574 96.9 4e-15 seq1260813 86.0 7e-12 >seq577692 Length=2825 Score = 468 bits (518), Expect = 5e-127 Identities = 510/677 (75%), Gaps = 0/677 (0%) Strand=Plus/Plus Query 165790 ACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCA 165849 || |||||||| || ||||| ||||||||||||| ||||||| || || || | | Sbjct 195 ACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCCTACCTTGCTAACT 254 Query 165850 GCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATC 165909 || || ||||| || | | || || | ||||| || |||||||| || ||||||||| Sbjct 255 GCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGATATTGACGGCATC 314 Query 165910 CGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTT 165969 || |||||||| | ||||||||| |||| || || ||||||||| | | || ||||| Sbjct 315 CGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCACCGCCGCTGTTGTA 374 Query 165970 CCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGAC 166029 ||| ||| || || ||||| | ||||| ||||||||||||||||| ||| |||| Sbjct 375 CCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGCGGCAAATATTGAT 434 Query 166030 GAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATC 166089 |||||||| |||||||| || || | ||| || |||| ||||||||||| || ||||| Sbjct 435 GAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACTTCCTAATCGGCATT 494 Query 166090 TATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATC 166149 | | ||| |||||||||||||||||||||||||| || |||| |||||||| ||||| Sbjct 495 TTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAATGCGTCCTTGGATT 554 Query 166150 TGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTC 166209 ||||||||| || || || |||||||||| || ||| | |||| ||| || || Sbjct 555 GCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGTTAGTTTATTCTATC 614 Query 166210 GGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATG 166269 ||||||||| ||| ||||||| | || || || || || || ||||| |||| ||| Sbjct 615 GGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCACATTTAACTTTATG 674 Query 166270 TTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCT 166329 || || | ||||| ||||| ||| || | ||||| |||||||||||||| || || ||| Sbjct 675 TTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATATGCTGGGAGTAGCT 734 Query 166330 GGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTC 166389 || || ||||||||| | | || ||||||||||| | |||| || |||||| | Sbjct 735 GGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCACGGTTCTCTGGTGACATCTTCTTTA 794 Query 166390 GTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAA 166449 || | || || ||||||| ||| ||||||| ||||| || |||||||||||| Sbjct 795 GTACGTGAAACCACTGAAATTGAAAGCCAAAACCGGGGTTATCGCTTTGGACAAGAAGAA 854 Query 166450 GAAACATACAACATCGT 166466 ||||| || ||||| || Sbjct 855 GAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 338 bits (374), Expect = 7e-88 Identities = 438/604 (73%), Gaps = 6/604 (1%) Strand=Plus/Minus Query 167012 GGTTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTG 167071 ||||||||||||||||||||||||| || | ||||| || || ||||| || ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 167072 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTT 167131 | | || ||||| ||| || ||||| |||| || || ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 167132 TCGTCACGAGTTGGTATACTCATGGACTCGCGTCCAGTT---ATCTTGAGGGTGCGAACT 167188 | || || |||||| || || |||||||| ||||| | || || ||| |||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGC---CAGTTCCTACCTAGAAGGTTGCAACT 904 Query 167189 TTCTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTAT 167248 |||| || || || || || || || || | | |||| || || |||| | || | Sbjct 903 TTCTGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGT 844 Query 167249 GGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTT 167308 ||||||| ||| |||| |||| || | | ||| |||| | ||||| | ||||||| Sbjct 843 GGGGTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTT 784 Query 167309 TTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTG 167368 |||| || || || ||||| || || || ||||| ||| || || ||||| ||| | | Sbjct 783 TTGTAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCG 724 Query 167369 CTCGCCTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCT 167428 | || || |||| || ||||| || ||||| || |||||| | || |||||||| || | Sbjct 723 CCCGGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGT 664 Query 167429 TCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCT 167488 |||| ||||| ||| | | || ||| | |||||| | ||||||||||| || || Sbjct 663 TCGTGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCT 604 Query 167489 TCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACAC 167548 | || || || | ||||||||| || |||| ||| |||||||||||||||||||||| | Sbjct 603 TTGGTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGC 544 Query 167549 TGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAA 167608 | || || || || |||||||| || || || |||||||||||||| | || | ||| | Sbjct 543 TCAACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTA 484 Query 167609 TCCA 167612 | || Sbjct 483 TTCA 480 Score = 102 bits (112), Expect = 9e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| || || || ||||| ||||| ||||| |||||||| ||||| ||||| |||||| Sbjct 368 GAAGAAACCTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCT 309 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGG 167811 || ||||||||||||| | || ||||| ||| | || ||||| || | || || ||| Sbjct 308 TTTTCCAACAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGG 249 Query 167812 A 167812 | Sbjct 248 A 248 >seq3816217 Length=329 Score = 309 bits (342), Expect = 3e-79 Identities = 266/329 (81%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 166276 TTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTA 166335 |||||||| || ||||| || || ||||| |||||||||||| | || |||||||| ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 166336 TTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGA 166395 || ||||| |||||| || |||||||| |||||| |||||||| | || | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 166396 GAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACA 166455 || || || |||| |||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 166456 TACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTC 166515 |||||||| || || ||||| |||||||||||||| ||||||||||||| ||||| ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 166516 AACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTC 166575 |||||| ||| ||| ||||||||||| | | ||| ||||| || |||||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 166576 ACCGCCCTTGGCGTCTCCACGATGGCATT 166604 ||||| | || || ||||| ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 251 bits (278), Expect = 8e-62 Identities = 223/276 (81%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 165778 TGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCA 165837 ||||| || ||| || ||||| || ||||| || ||||| ||| |||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 165838 ACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGAC 165897 || || | | || || ||||||| |||| |||| || |||||||||||||| |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 165898 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCT 165957 || ||||| ||||| |||||||| |||||||||||| |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 165958 GGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCC 166017 ||||| |||||||| || ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 166018 GCATCGCTT-GACGAATGGCTCTATAACGGTGGTCC 166052 || |||| || ||||||||||| |||||||| || Sbjct 247 GC-CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq658184 Length=760 Score = 129 bits (142), Expect = 6e-25 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 167012 GGTTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTG 167071 ||||||||||||||||||||||||| || | ||||| ||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 167072 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTT 167131 | | || ||||| ||| ||| ||||| |||| ||||| ||||| || || ||||| | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 167132 TCGTCACGAGTTGGTATACTCATGGACTCGC 167162 | || || |||||| ||||| |||||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGC 12 >seq3509123 Length=199 Score = 127 bits (140), Expect = 2e-24 Identities = 123/156 (79%), Gaps = 8/156 (5%) Strand=Plus/Plus Query 166612 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTC---AG-GGTCGTGTGTTGAACAC 166667 |||||||||||||||||||| |||| | |||| | || ||||| || | ||||| Sbjct 1 AACGGTTTCAACTTCAACCA----ATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACAC 56 Query 166668 CTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGC 166727 |||||| ||||| | ||||||||| || ||||||||||| ||||| ||||| ||||| Sbjct 57 CTGGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGC 116 Query 166728 ACACAACTTCCCCCTCGACCTCGCTGCTGCTGAGTC 166763 |||||||||||| | || | ||| |||||||||| Sbjct 117 TCACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 >seq3654882 Length=237 Score = 125 bits (138), Expect = 8e-24 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| || ||||| ||||| ||||| ||||| || |||||||| || ||||| |||||| Sbjct 184 GAAGAAACCTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCT 125 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGG 167811 || |||||||| ||| | || ||||| ||| | ||||||||||| | || || ||| Sbjct 124 TTTTCAAACAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGG 65 Query 167812 ACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCT 167871 | | || || || | | ||||| ||| | || || |||||||| || ||||| || Sbjct 64 ATGTGTTCCATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCA 5 Query 167872 CAAG 167875 |||| Sbjct 4 CAAG 1 >seq3172301 Length=157 Score = 122 bits (134), Expect = 9e-23 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 166120 TCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCT 166179 || ||||| | || |||||||| |||||||| || |||||| ||||| || || ||| Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 166180 GCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCA 166239 || |||||||||||| | | || || |||| |||||| |||||| || | ||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 166240 CTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274 || || ||||| ||||| ||||||| ||||||||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq2226574 Length=116 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 167529 AGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGG 167588 |||||||||||||||||| || || || || || |||||||| || || || ||||| || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 167589 TGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAG 167644 ||||| | || | ||| || ||||||| ||||||||| || || ||| ||||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq1260813 Length=100 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 18136 TAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAATCCTACCTG 18195 |||||||| || ||||| ||| ||||||| ||||||||||||||||| ||||||||| | Sbjct 1 TAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAATCCTACCCG 60 Query 18196 GGGAGTTGTT 18205 ||||||| || Sbjct 61 GGGAGTTTTT 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533408120800800