Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq577692 367 4e-97 seq3751544 196 1e-45 seq3816217 183 8e-42 >seq577692 Length=2825 Score = 367 bits (406), Expect = 4e-97 Identities = 509/713 (71%), Gaps = 0/713 (0%) Strand=Plus/Plus Query 41219 AATGCCTGGGAGCAGTTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGA 41278 |||| ||||| |||||||| | ||||| || ||||| |||||||| ||||||||||| Sbjct 159 AATGTTTGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGT 218 Query 41279 TGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTGCCGCTACAACTTGTTTTATTATCGCC 41338 ||||| || | | ||||| || | | || | || || | |||||| | | || Sbjct 219 TGGTTTGGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCT 278 Query 41339 TTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTG 41398 ||||| | ||||| ||||| || || || || ||||| |||||||| | || || ||| Sbjct 279 TTTGTAGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTG 338 Query 41399 TTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTA 41458 ||||| || || |||||||| | | || || || || || |||||| || || | Sbjct 339 TTGTACGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTG 398 Query 41459 CACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCA 41518 ||||| || || || |||||||| || | ||||||||||||| || |||||||| || Sbjct 399 CACTTTTATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCC 458 Query 41519 TTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGG 41578 | ||| | | || ||||||||||| || ||| | ||| || ||||| || |||||| Sbjct 459 TACCAGTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGG 518 Query 41579 GAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTC 41638 ||||| ||||| |||| ||| | || ||||| |||||| || |||||||| Sbjct 519 GAACTGTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTA 578 Query 41639 GCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCT 41698 || |||||||| || || | | |||||| | | || || || ||||||||||||| | Sbjct 579 GCTGCTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGT 638 Query 41699 ATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAAT 41758 | || ||||||| || ||||| || |||| ||| | ||| | || || ||||| ||| Sbjct 639 TTACCGCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAAT 698 Query 41759 ATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTC 41818 || | ||||| || || || |||||||| || || || || |||||||| | | ||| Sbjct 699 GTTTTAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTC 758 Query 41819 TCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTT 41878 || |||||||||||| ||||| || || || | | ||||| || |||||| | Sbjct 759 TCAGCTATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAA 818 Query 41879 TCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGT 41931 || ||| ||||| ||||| ||||| ||||| ||||| || ||||| Sbjct 819 AGCCAAAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3751544 Length=281 Score = 196 bits (216), Expect = 1e-45 Identities = 209/276 (76%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 41242 CTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCC 41301 |||||| || || || || ||||| ||||||||||| |||||||| || || ||||| || Sbjct 6 CTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCC 65 Query 41302 GTGCCTCCTTGCCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGA 41361 ||| || | ||||| | || | || ||||| ||| | | || || || || || Sbjct 66 TACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGA 125 Query 41362 CATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATC 41421 ||| || || ||||| |||||||| ||||| || |||||||| || ||||||||||| || Sbjct 126 CATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTC 185 Query 41422 AGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGC 41481 || || || ||||| | ||||| ||||| || ||||||||||| ||||||||||| Sbjct 186 TGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGC 245 Query 41482 TGCTACACTTGATGAATGGCTGTACAACGGCGGTCC 41517 || | | ||||||||||| |||||||| || || Sbjct 246 AGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3816217 Length=329 Score = 183 bits (202), Expect = 8e-42 Identities = 238/329 (72%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 41741 TTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTA 41800 ||||| || || ||||| || || ||||| || || || ||| |||| || || || ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 41801 TTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGT 41860 || ||||| ||||||||| || ||||||||| |||| || || || | | ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 41861 GAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACT 41920 || || || ||| | || || ||||| |||||||| || |||||||| ||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 41921 TACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTT 41980 ||||| ||||| || |||||||| || || ||||| || ||||||||||||||| || Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 41981 AATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040 || || |||| || || ||||| | | ||| ||||| || | || || ||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 42041 GCTGCGCTTGGCGTGTCTACCATGGCTTT 42069 | || | || || || |||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139324287836528