Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq577692 416 8e-112 seq3816217 230 6e-56 seq3751544 187 7e-43 seq3172301 113 1e-20 >seq577692 Length=2825 Score = 416 bits (460), Expect = 8e-112 Identities = 521/711 (73%), Gaps = 8/711 (1%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 ||||| |||||||| | ||||| || || || || ||||| |||||||| || |||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 42340 GGTGTGCTGATGATTCCCTGTCT-GCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCAT 42398 ||| | ||||||| |||| || ||| |||| |||| ||||||| | | ||||| | Sbjct 225 GGTATTGTGATGAT-CCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGT 283 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 ||||| ||||| || || ||||| ||||| || ||||| || || || ||||| |||| Sbjct 284 AGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTA 343 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||||| ||||||||| | | || || || || || ||| || ||||| | || || Sbjct 344 CGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTT 403 Query 42519 GTATTCGATCTGGGAA---GCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTA 42575 ||| | ||||||||| || |||| |||| |||||||| || || ||||| || || Sbjct 404 TTATCCCATCTGGGAAGCGGCAAATA---TTGATGAATGGCTTTATAACGGCGGCCCCTA 460 Query 42576 TCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGA 42635 ||| | | || ||||||||||| ||||| || || | || |||| || || ||||| Sbjct 461 CCAGTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGA 520 Query 42636 ACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGC 42695 ||| || || || | || ||| | || ||||| ||||||||| || ||||| || Sbjct 521 ACTGTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGC 580 Query 42696 TGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAAT 42755 ||| ||||| || || | | || ||| | | || |||||||||||||| ||||| | Sbjct 581 TGCTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTT 640 Query 42756 GCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACAT 42815 || || || ||||| || || || ||||| ||||| || | || || || ||||| | Sbjct 641 ACCGCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGT 700 Query 42816 TCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTC 42875 | | ||||| || ||||||||||| || || || || || |||||||| | | ||||| Sbjct 701 TTTAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTC 760 Query 42876 AGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAG 42935 ||||||||| ||| ||| || || |||||| | || |||||||| ||||||| ||||| Sbjct 761 AGCTATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAG 820 Query 42936 CCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGT 42986 |||||| || || || || ||||| || || |||||||||||||| Sbjct 821 CCAAAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 230 bits (254), Expect = 6e-56 Identities = 232/302 (77%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 42796 TTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTA 42855 ||||| || ||||| ||||| || ||||| || ||||||||| | || ||||| || ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 42856 TTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGT 42915 || ||||| | |||||||| || ||||| ||| | | || || ||||| | |||||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 42916 GAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACT 42975 ||||| || |||| |||| ||||| || || ||||| ||||||||||| || || || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 42976 TATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT 43035 || |||||||| ||||| || |||||||| || || || |||||||||||||| || || Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 43036 AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTC 43095 || || || || || |||||||||| | | |||||||| || | || || |||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 43096 AC 43097 || Sbjct 301 AC 302 >seq3751544 Length=281 Score = 187 bits (206), Expect = 7e-43 Identities = 210/281 (75%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 42292 TGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATG 42351 |||| |||||| || || || |||||||| |||||||| || ||||| ||||| |||||| Sbjct 1 TGTAGCTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATG 60 Query 42352 ATTCCCTGTCTGCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCG 42411 || || || || ||||||||| ||| | || ||||||| || ||||| || || Sbjct 61 ATCCCTACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCC 120 Query 42412 GTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATC 42471 || |||||||| || || || ||||| || |||| ||||| |||| |||||||||||| Sbjct 121 GTGGACATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATC 180 Query 42472 ATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATCTGG 42531 ||||||||||| || || ||| | || || || || || || || || | || ||| Sbjct 181 ATCTCTGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGG 240 Query 42532 GAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACC 42572 ||||| | | | || |||||||||||||| || || || Sbjct 241 GAAGCAGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 113 bits (124), Expect = 1e-20 Identities = 120/156 (77%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 42640 TCGTACCGACTTGGGA-TGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 || ||||| ||||||| || | || ||||||| || |||||| || ||||| || || Sbjct 155 TCCTACCG-CTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGC 97 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 || | |||||| ||| | |||| || | || ||||||||||| || || || ||||| Sbjct 96 TGCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCC 37 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGT 42794 ||| || || ||||| || ||||||||||||||||| Sbjct 36 TCTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136769053808536