Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq577692 457 1e-123 seq3816217 275 7e-69 seq3751544 226 3e-54 seq3509123 127 2e-24 seq3172301 104 3e-17 >seq577692 Length=2825 Score = 457 bits (506), Expect = 1e-123 Identities = 519/691 (75%), Gaps = 4/691 (1%) Strand=Plus/Plus Query 154978 TGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCT 155037 |||||||| ||| | | |||||| | ||||| |||||||| ||| || | ||||||||| Sbjct 183 TGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCCT 242 Query 155038 TGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGAC 155097 | | || |||| | | || || | | || || | |||||||||||||| || Sbjct 243 ACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGAT 302 Query 155098 ATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCT 155157 ||||| || || || |||||||| | |||||| | |||| || || ||||||||| | Sbjct 303 ATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCACC 362 Query 155158 GGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCA 155217 | |||||||| || ||||| || || ||||| | ||||| ||||| || |||||||| Sbjct 363 GCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGCG 422 Query 155218 GCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTC 155277 |||| | ||||||| ||| | || || || || || | ||| | | || ||||||||| Sbjct 423 GCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACTTC 482 Query 155278 CTTATCGGAATCACA-GC-ATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCA 155335 || ||||| || || ||| || |||||| |||||||||| ||||| || | || | Sbjct 483 CTAATCGGCATTTTTTGCTATA-TG-GGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAA 540 Query 155336 TGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCC 155395 ||||||||||||| |||||| || || || ||| |||||||| || ||| | Sbjct 541 TGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGT 600 Query 155396 TTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTA 155455 | |||||| || |||||||||||||||| ||||||| | || || || || ||||| | Sbjct 601 TAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCA 660 Query 155456 CTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACA 155515 | ||||||| |||||| ||| | |||||||| || ||| | | |||||||||||||| | Sbjct 661 CATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATA 720 Query 155516 TGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGG 155575 |||| |||||||| ||||| || ||||| |||||||||| |||||||||||||| ||| Sbjct 721 TGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCACGGTTCTCTGG 780 Query 155576 TGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGT 155635 |||||||||| || | |||||||| ||||| || || ||| ||||| | Sbjct 781 TGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGGGGTTATCGCT 840 Query 155636 TCGGACAAGAAGAAGAAACTTATAACATTGT 155666 | ||||||||||||||||||||||||||||| Sbjct 841 TTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 275 bits (304), Expect = 7e-69 Identities = 261/332 (79%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 155476 TTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTG 155535 ||||||||||||||||| ||||| |||||||||||||| ||| | ||||| || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 155536 TTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGT 155595 |||||||| || | ||||| || ||||||||||| ||||| || ||||| | | ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 155596 GAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACT 155655 ||||| || || || ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 155656 TATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTC 155715 || |||||||| || ||||| || ||||||||||| || |||||||| ||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 155716 AACAACTCAAGAAGT---CTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGG 155772 |||||| || || || ||||||||| | | ||| ||||| || || |||||||| Sbjct 241 AACAAC---AGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGG 297 Query 155773 GCAACTGCTATGGGTGTGTCAACGATGGCATT 155804 || ||| | ||||| || || ||||| || Sbjct 298 TTCACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 226 bits (250), Expect = 3e-54 Identities = 215/275 (78%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 154978 TGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCT 155037 |||||||| || | |||||||| | ||||| || |||||||||||||| ||||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 155038 TGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGAC 155097 ||| || ||||| | | |||| ||| |||| || || ||||| || || || ||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 155098 ATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCT 155157 ||||| ||||| || |||||||| ||||||||| | |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 155158 GGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCA 155217 ||||| ||||| ||| || || || || ||||| |||||||| || |||||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 155218 GCAACTCTTGATGAGTGGTTGTACAATGGTGGTCC 155252 || | | ||||| ||| | ||||| ||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3509123 Length=199 Score = 127 bits (140), Expect = 2e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 155812 AACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGG 155871 |||||||||||||||||||| || ||| | ||| | || ||| || | || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 155872 GCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCAC 155931 || || | | ||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 155932 AACTTCCCTCTTGACCTTGCTGCTGCTGAGTCAGTGCCTGTTGCACTTACTGCACCTAGC 155991 |||||||| | || | ||| |||||||||| | |||||| || | ||||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCTCAA 180 Query 155992 ATCGG 155996 ||||| Sbjct 181 ATCGG 185 >seq3172301 Length=157 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 155320 TCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCT 155379 || ||||| | || ||||||||||||||||| || || ||| ||||| || | ||| Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 155380 GCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCT 155439 || || |||||| | | || || |||| |||||||||||||| || | |||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 155440 CTTGGTATCTCTGGTACTTTTAACTATATGTTCGT 155474 || |||||||| || ||||| |||| ||||| || Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555825312535920