Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq577692 333 7e-87 seq3816217 246 8e-61 seq3751544 187 7e-43 seq3509123 113 1e-20 >seq577692 Length=2825 Score = 333 bits (368), Expect = 7e-87 Identities = 508/713 (71%), Gaps = 12/713 (2%) Strand=Plus/Minus Query 40818 ACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTT 40877 || ||||||||||| || |||| || ||||| ||| || ||| || |||| || Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 40878 TCCGTGGTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAA 40937 || ||||| || || | | || || || || || ||||||||||| | || | | Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 40938 GCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGT 40997 || ||||||||||| || || || || ||||||||||| |||||||| | || || || Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 40998 TCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCA 41057 |||||||| | || ||||| ||||| ||||| ||| || || | || | ||||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 41058 GAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGC--TAG-AGCTGCTGACAAT 41114 || |||||||| ||||||| | ||||||||| | ||| || | | ||| ||| ||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCT-ACA-- 575 Query 41115 GGAGCTGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCAC 41174 ||||| | || || ||| ||||| || | ||| |||| | || || ||||||||| Sbjct 574 GGAGCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCAC 515 Query 41175 TGTCTACCAGCGTAT-GCTGCTACT-CCTATTAAAAAGTGAAAGACAATGAGTTGATATG 41232 | | ||| | ||| || | | || |||| ||||| || ||||| | || || | Sbjct 514 TCACGACC--CATATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGG 457 Query 41233 GTCCGCCGTTGTATAGCCACTCGTCCA-GTGTGCCGGCTTCCCAGATTGGGTAGAAATGT 41291 | |||||||| || ||||| || || | | |||| ||||||||||| || || || || Sbjct 456 GGCCGCCGTTATAAAGCCATTCATCAATATTTGCC-GCTTCCCAGATGGGATAAAAGTGC 398 Query 41292 AGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATT 41351 | || || || ||||| || || || ||||| | | || || || || ||||||| Sbjct 397 AACCCAATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAAC 338 Query 41352 AACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAG 41411 | || ||||||||||| || || ||||| || ||||| ||||| ||||| || | ||| Sbjct 337 AGAGAACCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAA 278 Query 41412 GCGATTATGAAACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAA 41471 || | | ||||| |||| |||||||| || | || ||||| | | |||||||||| Sbjct 277 GCTAACACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAA 218 Query 41472 CCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAACTTCTCCCA 41524 ||||| || |||||||| | ||| || ||||| | ||||||| ||||| Sbjct 217 CCTACATAAAGGCGGTTATTGGTAGATGTTACCCAAGTGCAAAACTGTTCCCA 165 >seq3816217 Length=329 Score = 246 bits (272), Expect = 8e-61 Identities = 252/329 (77%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 40680 AAAGCCATAGTAGATATACCCATGGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCA 40739 || ||||| || |||| ||| | | ||| | ||| ||||| || ||||| ||||||| Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 40740 AGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCA 40799 | |||||||| || | |||||| |||||||| ||||||||||| || || || | ||| Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 40800 AAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCG 40859 ||||||||||| || || || ||||| || || || |||| ||||| || || || ||| Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 40860 TAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCG 40919 ||||| || ||||| |||| ||||| || || | | || ||||| || | ||| Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 40920 TGCATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGG 40979 ||||| || | |||||||||||||| || || || ||||| || | ||||||||| ||| Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 40980 TGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 ||||| || |||||||||||||||||||| Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 187 bits (206), Expect = 7e-43 Identities = 210/281 (75%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 41232 GGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGT 41291 || || |||||||| ||||| || |||| || | |||||||| || |||||||| || Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 41292 AGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATT 41351 || ||||| || || ||| ||||| || || ||||| || || ||||| ||||||| Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 41352 AACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAG 41411 | || || | ||||| || || || || || || || || || || || |||||||| Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 41412 GCGATTATGAAACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAA 41471 ||||| ||| | || ||||||||||||||| | || ||||| || ||||| ||||| Sbjct 101 GCGATGATGTAGCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCAG 42 Query 41472 CCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACA 41512 ||||| || |||||||||| |||| || |||||| |||| Sbjct 41 CCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAGCTACA 1 >seq3509123 Length=199 Score = 113 bits (124), Expect = 1e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 40521 GACTCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCC 40580 ||||||||||||||||| |||| || |||||||||||||| |||||||||||||||||| Sbjct 152 GACTCAGCAGAAGCTAAATCTAAGGGGAAGTTGTGAGCGTTGCGCTCGTGCATTACTTCC 93 Query 40581 ATACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCG 40640 ||||| || | | ||| | ||||||||||| || || || ||| | | | Sbjct 92 ATACCCAGGTTAGCGCGGTTGATGACATCAGCCCAGGTGTTAACTACCCGACCGCTGGAG 33 Query 40641 TCTACTACTGACTGGTTAAAGTTAAAACCATT 40672 || | ||| || ||||| ||||| ||||| || Sbjct 32 TCCATTACGGATTGGTTGAAGTTGAAACCGTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136930661688588