Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq577692 369 4e-97 seq3816217 266 3e-66 seq3751544 178 1e-39 seq3509123 122 9e-23 seq3172301 113 5e-20 >seq577692 Length=2825 Score = 369 bits (408), Expect = 4e-97 Identities = 491/675 (73%), Gaps = 8/675 (1%) Strand=Plus/Minus Query 67647 ACAATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGC 67706 |||||||| ||||| |||||||||||||| || ||||| ||| || || Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 67707 TCAGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGC--ACTAAAGA 67764 ||||| ||||| | | | |||||| || || ||||||||||||||||| | ||||| Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 67765 GTGAACCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGT 67824 | | ||||| || ||||| |||||||| ||||||||||| |||||||| | | || | Sbjct 751 GCG--CCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTAT 694 Query 67825 GCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGT 67884 |||||||||| | ||| ||||| ||||||| || |||||||| || || || | | | Sbjct 693 GCTCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCAT 634 Query 67885 CAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTG 67944 |||| |||||||||||||||| || ||| || || | || || || |||| || | Sbjct 633 CAGAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAG 574 Query 67945 GAGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACT 68004 |||| || || ||| |||||||||||||| || | || ||||| |||||||||| Sbjct 573 GAGCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACT 514 Query 68005 GACGACCACAGTAT-GC-TGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGG 68062 |||||| || ||| || || ||||| ||||||||||| || | | ||| | || Sbjct 513 CACGACC-CA-TATAGCAAAAAATGCCGATTAGGAAGTGGAAAACAATCAACTGGTAGGG 456 Query 68063 TCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAG 68122 || || ||||| | ||| ||||| | | |||| ||||||||||| ||||| ||||| | Sbjct 455 GCCGCCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAA 396 Query 68123 ACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAG 68182 || || || || ||||| || |||||||| | | |||||||| || ||||||| || Sbjct 395 CCCAATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAG 336 Query 68183 CGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGC 68242 ||||| | ||| ||||| | ||| || || ||||| || |||||||| || | || || Sbjct 335 AGAACCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGC 276 Query 68243 AATGATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302 | | || || | | || | |||||| ||| ||||||| | ||| |||||||| Sbjct 275 TAACACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACC 216 Query 68303 AACATAGATGCGATT 68317 ||||| | ||| || Sbjct 215 TACATAAAGGCGGTT 201 >seq3816217 Length=329 Score = 266 bits (294), Expect = 3e-66 Identities = 259/332 (78%), Gaps = 6/332 (2%) Strand=Plus/Minus Query 67509 AATGCCATAGTTGACACACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCA 67568 || ||||| || || ||||| | || ||||||||||||| || || || | ||| | Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 67569 AGGAAGAAGTGAAG---ACTTCTTGAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGA 67625 | ||||||||| || || || |||||||||||| ||||| |||||||||| |||| Sbjct 269 AAGAAGAAGTGCAGGGAACGGCT---GTTGTTGAAAGAAGCATATTGGAAGATCAGGCGA 213 Query 67626 CCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAA 67685 |||||||| || ||||| || ||||||||||| || ||||||||||| ||||| |||||| Sbjct 212 CCGAAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAA 153 Query 67686 CCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAA 67745 |||||||| || || || || || ||||| | | | |||||||| || | |||| Sbjct 152 CCGTAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAA 93 Query 67746 CCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCAAGCATATGGAAT 67805 |||||||| || || | | ||||||||||||||| || ||||| | ||||||||| Sbjct 92 CCGTGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAG 33 Query 67806 GGGTGCATAAGGATGTTGTGCTCTGCTTGGAA 67837 |||||||| ||||||||||| ||||||||||| Sbjct 32 GGGTGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 178 bits (196), Expect = 1e-39 Identities = 208/281 (74%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 68061 GGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGA 68120 || ||||| || || | ||| ||||| | | ||||||||||| || || |||||||| Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 68121 AGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATG 68180 |||||||| || || || ||||||||| |||||||| ||||||||||| ||||||| Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 68181 AGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAAT 68240 || ||||| || || ||||| | |||||| || || || || || || || || || || Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 68241 GCAATGATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAA 68300 || |||||| |||| | | || | || | | ||| ||||||| ||||||||||| Sbjct 101 GCGATGATGTAGCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCAG 42 Query 68301 CCAACATAGATGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || ||||| | ||| |||| || || |||||| |||| Sbjct 41 CCTACATAAAGGCGGTTGTTGGTGGATGTTACCCAGCTACA 1 >seq3509123 Length=199 Score = 122 bits (134), Expect = 9e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 67312 ATTAACCGATGCTAGGTGCAGTAAGTGCAACAGGCACAGACTCAGCAGCAGCAAGGTCAA 67371 |||| ||||| ||||||| | || |||||| |||||||||||| ||| | || | Sbjct 190 ATTAGCCGATTTGAGGTGCAACCAAAGCTACAGGCTCAGACTCAGCAGAAGCTAAATCTA 131 Query 67372 GAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTGTTAA 67431 ||||||||||||||||| ||||||||||| |||||||| || || || | ||| | Sbjct 130 AGGGGAAGTTGTGAGCGTTGCGCTCGTGCATTACTTCCATACCCAGGTTAGCGCGGTTGA 71 Query 67432 GGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTGAAGT 67491 || || ||||| || || || ||| | | ||| | |||||||||||||||| Sbjct 70 TGACATCAGCCCAGGTGTTAACTACCCGACCGCTGGAGTCCATTACGGATTGGTTGAAGT 11 Query 67492 TGAAACCGTT 67501 |||||||||| Sbjct 10 TGAAACCGTT 1 >seq3172301 Length=157 Score = 113 bits (124), Expect = 5e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 67839 ACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCT 67898 || |||||| |||| ||||| || || ||||| |||||||| |||| |||||||||||| Sbjct 1 ACCAACATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCT 60 Query 67899 TGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCT 67958 || |||| || |||| |||||| || || || || | || || || ||| ||| Sbjct 61 TGTCCGATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCT 120 Query 67959 ACACAGATCCAAGGACGCATACCAAGACGGTAAGA 67993 || ||||||||||||||||| || | ||||| || Sbjct 121 ACGCAGATCCAAGGACGCATTCCCAAGCGGTAGGA 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538824620391120