Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq832659 102 2e-16 seq431264 84.2 6e-11 >seq832659 Length=813 Score = 102 bits (112), Expect = 2e-16 Identities = 158/218 (72%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| | |||||| ||||| |||||||| || || ||||||| ||||| || || Sbjct 580 ACCAGTTTCTGCTGTTTTCACAGCAGTATCAATGAGTCCCTCACGACCTCCCATGGCGTG 639 Query 302667 GAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGC 302724 |||||| | ||| | |||| || || ||| |||| |||| |||||||| | Sbjct 640 GAAGAACATCTCAGATGGGGTC--AGTCCGGCAAGGTAGGAATTCTCTACGAAACCTCTG 697 Query 302725 GCCTCGGG--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCC 302780 |||||| || ||||||| |||| | ||||| |||| ||| | | || | | || Sbjct 698 CTCTCGGGACCGTAATCGTC---CTTGATGAAGTGAGGCAAGGTGCGATGTCGGAAA-CC 753 Query 302781 GTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 | |||||||||| || || || ||||||||||| |||| Sbjct 754 GAATGGGATACGTTTGCCCTCCACGTTCTGCTGGCCCA 791 >seq431264 Length=3073 Score = 84.2 bits (92), Expect = 6e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| |||||| | |||||||| || ||||||||||||||| || || || || Sbjct 2605 GCATAGGTTACTGCATTTGATGGTTCCCAAATTCTTCTGGTTACTCTTTCTATTGCAGTG 2664 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767 ||| ||||| || |||||||||||||| ||||| |||| || ||||| | ||| Sbjct 2665 ATCTTTGTACAGCATGTATGGGGTTCCCGTCTCTGTCTGGGCTTCCAGGACAGCGTACCA 2724 Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTC 155806 || | | || || |||| ||| | ||||||||||| Sbjct 2725 TAGCTTCTGTGCCTTGATTTTCTTCCTATATCTGCCTTC 2763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1396985075355034