Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq577692 399 2e-106 seq3816217 210 2e-49 seq3751544 190 2e-43 seq3654882 114 1e-20 seq3172301 113 5e-20 seq658184 109 6e-19 seq3509123 102 9e-17 seq856283 102 9e-17 >seq577692 Length=2825 Score = 399 bits (442), Expect = 2e-106 Identities = 515/708 (73%), Gaps = 2/708 (0%) Strand=Plus/Plus Query 72226 TGGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTT 72285 ||||| ||||||| ||||||||||| || | || ||| | || || ||||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 72286 GGTGTCTTAATGATCCCATGTCTT-CTAACTGCTGCTGCTTGTTTCATTGTAGCATTCAT 72344 ||| | | |||||||| | ||| |||||||| | ||||| | |||| || | Sbjct 225 GGTATTGTGATGATCCC-TACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGT 283 Query 72345 CGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATA 72404 ||||| ||||| || ||||| ||||| ||| | ||||| ||| | |||||| | || || Sbjct 284 AGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTA 343 Query 72405 TGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTT 72464 || || ||||||||| | | ||||| || || ||| || || || || || ||||| Sbjct 344 CGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTT 403 Query 72465 CTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCA 72524 ||||||||||||||||| || | ||| || || ||| | |||||||| || || ||||| Sbjct 404 TTATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCA 463 Query 72525 GTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACT 72584 ||| || ||||||||||||| || || || | | ||| |||||| | |||||||||| Sbjct 464 GTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACT 523 Query 72585 ATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGC 72644 || || | |||||||| | |||||||| ||| || || || |||||| |||| Sbjct 524 GTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGC 583 Query 72645 AGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCC 72704 || || ||| | | || ||| | ||||||| ||||| || ||||||||| | || Sbjct 584 TGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACC 643 Query 72705 ACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACT 72764 || || || || || || || ||||| ||||| ||| | |||||||| || || | | Sbjct 644 GCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTT 703 Query 72765 AATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGC 72824 ||||||||||||||||||| || ||||| ||| | || ||||| ||| ||| || Sbjct 704 AATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGC 763 Query 72825 AATGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCA 72884 ||||||||||| || || || || ||| || | | || || || || | || || || Sbjct 764 TATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCA 823 Query 72885 AAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGT 72932 |||| || ||| || ||||||||||||||||| ||||||||||| Sbjct 824 AAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 210 bits (232), Expect = 2e-49 Identities = 244/329 (74%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 72742 TTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATG 72801 |||||||||||||||||||| || |||||||||||||||||| || || || ||| | Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 72802 TTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCACTTGTTACTTCATCTCTAATCAGA 72861 ||||||||| | | ||| || ||||||||||| | || ||||| || | | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 72862 GAGACAACAGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACA 72921 || || || || | ||| |||||||||||| || || ||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 72922 TATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTC 72981 || |||||||| || ||||| || ||||||||| | | |||||||| ||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 72982 AACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTA 73041 |||||| ||||| | ||||||||| | | || | || ||| || | | ||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 73042 ACCTCAATGGGTATCTGTACAATGGCATT 73070 ||| | | ||| | | || ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 190 bits (210), Expect = 2e-43 Identities = 207/275 (75%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 72244 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 72303 |||||||||||||| |||| ||| | || || || ||||| ||||| | |||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 72304 TGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGAT 72363 || ||||||||| | || | ||| | || || ||||||||||| || || || Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 72364 ATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCT 72423 || ||||| ||| | ||||| || || |||||| | || || || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 72424 GGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGCA 72483 ||||| || ||||| || || || || || || | |||||||| ||||| ||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 72484 GCCACTATGGACGAGTGGTTGTATAACGGAGGTCC 72518 |||| |||| || ||| | || ||||| || || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 74026 ATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGATTAC 74085 ||||| || ||| |||| || || || || || | ||||| || ||| ||| | || Sbjct 221 ATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAACCTATTCCATGGTGAC 162 Query 74086 TGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACA 74145 || ||| | || ||||| || || || ||||| || |||||||||||| | | ||||| Sbjct 161 AGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAACAAACGTTGGTTACA 102 Query 74146 CTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGG 74205 |||| | ||| ||||||| || || | ||| |||||| | || || ||| | || || Sbjct 101 CTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTCCATCGGTGTAGTGGG 42 Query 74206 TCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAG 74246 |||||| | ||||| | || || ||||| || || |||| Sbjct 41 TCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACAAG 1 >seq3172301 Length=157 Score = 113 bits (124), Expect = 5e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 72584 TATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTG 72643 |||| ||| | | |||||| | |||||||| || ||||| ||| |||||||| | | Sbjct 157 TATCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGG 98 Query 72644 CAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGC 72703 | || |||||||||| | | || || |||| || ||||| ||||| || ||||||| Sbjct 97 CTGCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGC 38 Query 72704 CACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGT 72740 | || |||||||| || || |||||||||||||| || Sbjct 37 CTCTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq658184 Length=760 Score = 109 bits (120), Expect = 6e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 73362 GGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTG 73421 ||||||| || || ||||| ||| | ||| | ||||| || |||||| | |||||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 73422 GTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTT 73481 || | | ||||| || ||||| || ||| | ||||| || ||| || |||||||| | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 73482 TCGTGACCTCATGGTACACACATGG 73506 | || ||||| |||||||| || || Sbjct 42 TTGTTACCTCTTGGTACACTCACGG 18 >seq3509123 Length=199 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 73078 AACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACATGG 73137 ||||| ||||||||||||||||| || | || | | ||| | | || || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 73138 GGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACAC 73197 | ||||| | ||| | || ||||| || |||||||| ||||| || | || || ||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 73198 AACTTCCCACTAGACCTAGCATCTGCTGAGTCTACAACAGTTGCATTAACTGCACCTTCA 73257 |||||||| |||| |||| |||||||||||| | || || || ||||||| | Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCTCAA 180 Query 73258 ATCGGTTAATT 73268 ||||| ||||| Sbjct 181 ATCGGCTAATT 191 >seq856283 Length=1080 Score = 102 bits (112), Expect = 9e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 74026 ATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGATTAC 74085 ||||| || ||| | || || || || || || | ||||| || || ||| | || Sbjct 405 ATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAACCTACTCCATGGTGAC 346 Query 74086 TGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACA 74145 |||||| | |||||||| ||||| || ||||| || ||||| |||||| | | ||||| Sbjct 345 AGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAACAAACGCTGGTTACA 286 Query 74146 CTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGG 74205 |||| | ||| |||| || ||||| | || |||||| | || || ||| | ||||| Sbjct 285 CTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTCCATCGGTGTAGTAGG 226 Query 74206 TCTAGC 74211 |||||| Sbjct 225 TCTAGC 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544457050060560