Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq577692 441 8e-119 seq856283 398 9e-106 seq3816217 315 8e-81 seq3751544 260 2e-64 seq940596 156 5e-33 seq3654882 143 3e-29 seq658184 122 1e-22 seq2226574 114 1e-20 seq3172301 109 6e-19 >seq577692 Length=2825 Score = 441 bits (488), Expect = 8e-119 Identities = 522/707 (74%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 177549 TGGGAATCATTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 177608 |||||| || ||| |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 177609 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCGTC 177668 || | ||||||| || || || | | || || ||||| || | | || || || Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 177669 GCTGCTCCCCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 177728 ||||| || || ||||| || ||||||||||| |||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 177729 GGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTC 177788 || || ||||||||| | | || |||||||| ||| || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 177789 TATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 177848 ||||||||||||||||| ||| ||||||| ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 177849 CTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTT 177908 | | || || |||||||| |||||||| | | |||||||| |||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 177909 TCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCA 177968 || || || |||| ||||| || ||||| |||||| || || ||||| || || Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 177969 GCATCCGCAGTCTTTCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCT 178028 || | || || | |||| ||| || ||||||||||||| || || |||| | | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 178029 CTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTT 178088 || || || ||||| || ||||||| ||| | || | |||||||| || ||| | | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 178089 ATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCT 178148 |||||||| ||||| ||||| || || ||||| || || ||||| |||||||||| ||| Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 178149 ATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAG 178208 ||||| || ||| || || ||||| | || ||||| || || |||| ||| ||| Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 178209 AACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGT 178255 ||| ||||| || ||||||||||||||||| |||||||| || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 398 bits (440), Expect = 9e-106 Identities = 451/602 (75%), Gaps = 2/602 (0%) Strand=Plus/Minus Query 178937 GGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTG 178996 |||| |||||| | ||||||||||| || || ||||| || || |||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 178997 GACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTT 179056 | |||| ||| | ||| || ||||| | || || || ||| | || || || | | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 179057 TTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTC 179116 ||||||| |||||||||||| || || || |||||||| || |||||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 179117 TTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGG 179176 | || || || ||| || || ||| | | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 179177 GTCCTGAGTCTCAG-GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTC 179235 |||| || ||||| |||| ||| | || ||||||||| | ||||| ||||| ||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACC-CGCTGGTGCCAATTAGGGGGTTTATGGGCTTTT 782 Query 179236 GTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCA 179295 || || || || || || ||||| || ||||| ||| || |||||||| ||| | || Sbjct 781 GTAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCC 722 Query 179296 CGTCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTC 179355 || | | || || |||||||| |||||||| ||||| || || ||||||||||| ||| Sbjct 721 CGGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTC 662 Query 179356 GTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTT 179415 || || ||||| | || ||||| | || ||||| | ||||||||||| || ||| Sbjct 661 GTGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTT 602 Query 179416 GGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTC 179475 ||||| || | ||||| | || | || ||||| ||||| |||||||||||||| ||| Sbjct 601 GGTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTC 542 Query 179476 AACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATT 179535 |||||||| ||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct 541 AACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATT 482 Query 179536 CA 179537 || Sbjct 481 CA 480 Score = 113 bits (124), Expect = 5e-20 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 179565 TGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGAC 179624 |||||| |||||| | | ||||| || || || || | || |||| || || || Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 179625 CTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAA 179684 ||| || ||||| ||||| ||||| || ||||| ||||| ||||| || | ||| ||| Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 179685 TAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTC 179744 || || ||||| |||||||| | ||||||||||||||| | || || ||| | | ||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTC 241 Query 179745 TATTGGCATCATTGGGCTAGCT 179766 || || | | || |||||| Sbjct 240 CATCGGTGTAGTAGGTCTAGCT 219 >seq3816217 Length=329 Score = 315 bits (348), Expect = 8e-81 Identities = 267/329 (81%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 178065 TTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTA 178124 ||||||||||||||||| ||||| |||||||| ||||| ||| | || |||||||| ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 178125 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGT 178184 |||||||| || | ||||| || ||||| || | | || |||||||| | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 178185 GAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACA 178244 || || || |||| || || || ||||| |||||||| ||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 178245 TATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTC 178304 || ||||| || ||||| || |||||||||||||| |||||||||||||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 178305 AACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTC 178364 |||||| |||||| |||||||||||| | | || ||||| ||| | || ||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 178365 ACCGCACTTGGTGTATCCACCATGGCATT 178393 ||||| | ||||||||||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 260 bits (288), Expect = 2e-64 Identities = 226/277 (82%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 177567 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177626 |||||||| || ||||| |||||||| ||||| || |||||||| || |||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 177627 ACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGAC 177686 || || | | || || ||||||| |||| |||| || |||||||||||||||||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 177687 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 177746 || ||||| ||||| |||||||| |||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 177747 GGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 177806 ||||| ||||| || || ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 177807 GCATCA-CTT-GATGAGTGGCTGTATAACGGTGGTCC 177841 || || ||| ||||| ||||| || |||||||| || Sbjct 247 GC--CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq940596 Length=2461 Score = 156 bits (172), Expect = 5e-33 Identities = 186/250 (74%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 138512 AAATCTTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTG 138571 ||| | | || || | ||||||| || || || |||||||| || ||||| || | | Sbjct 1405 AAACCATCGATTGCGATGATGATACATATATTCTCGATGCTGCCGAAGAAGCTGGACTAG 1346 Query 138572 ATCTTCCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTA-AATTAGTTGAA 138630 |||| ||||||||||| ||||||||||| || || ||||||||||||| ||| | | Sbjct 1345 ATCTGCCCTACTCCTGCCGTGCTGGTGCTTGCTCCACCTGTGCTGGTACAATCACCAG-T 1287 Query 138631 GGAACTGTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTT 138690 || || | || |||||||| ||||||||| | |||||||| || || | ||| || | | Sbjct 1286 GGTACCATTGACCAGTCTGATCAGTCTTTCTTAGATGATGATCAGATCGAAGCTGGGTAT 1227 Query 138691 ATCATGACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGAC 138750 | ||||||| ||||| || ||||| ||||| || | ||| ||||| | |||| || Sbjct 1226 GTTTTGACTTGTGTAGCCTATCCCACCTCCGACTGCACAATCAAAACTCACCAAGAAGAA 1167 Query 138751 GAACTATACT 138760 | ||| |||| Sbjct 1166 GGACTCTACT 1157 >seq3654882 Length=237 Score = 143 bits (158), Expect = 3e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 179565 TGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGAC 179624 |||||| |||||| | | ||||| || ||| || || | || |||| ||| || || Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 179625 CTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAA 179684 |||||| ||||| ||||| ||||| |||||||| || || ||||| || | ||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 179685 TAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTC 179744 || |||||||| |||||||| | |||||| ||||| || | ||||| ||| | | ||| Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 179745 TATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTG 179793 || || | | || |||||| | || || ||||||||||| || ||| Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTG 8 >seq658184 Length=760 Score = 122 bits (134), Expect = 1e-22 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 178937 GGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTG 178996 |||| |||||| | ||||||||||| || || ||||||||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 178997 GACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTT 179056 | |||| ||| | ||| ||| ||||| | || ||||| ||||| || || || | | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 179057 TTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTA 179096 ||||||| ||||||||| || || || || |||||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 >seq2226574 Length=116 Score = 114 bits (126), Expect = 1e-20 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 179454 AGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGG 179513 ||| |||||||||||||| || |||||||| ||||||||||||||||| || ||||| || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 179514 TGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAG 179569 ||||| || || | |||||||||||| | || ||||| || || ||| ||||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq3172301 Length=157 Score = 109 bits (120), Expect = 6e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 177909 TCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCA 177968 || ||||| | || ||||| || |||||||| || || ||| ||||||||||| || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 177969 GCATCCGCAGTCTTTCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCT 178028 || ||||| || | |||| || |||| |||||||| |||||||| | ||||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 178029 CTTGGTATCTCTGGTACTTTTAACTACATG 178058 || |||||||| || ||||| |||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575623971903120