Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq832604 96.9 3e-15 >seq832604 Length=1428 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 25552 AAAGCCATGAGCGAAACCAGGAGGAATCCAAAATTGTGTTTTATTCTTTTCAG--ATAAG 25609 ||| |||||||| || || ||||||||||| ||||| || || ||||||| | || Sbjct 1154 AAAACCATGAGCAAATCCGGGAGGAATCCACAATTG---TTGCTTATTTTCAGCACTCAG 1210 Query 25610 AGAACA-CCTACCCATTCTCCAAATGTTGGACTACCAACCCTAATATCTACAGCAACATC 25668 | || | |||||||| | ||||| ||||| || || ||||||||| || ||||| Sbjct 1211 ATAATAGCCTACCCACTGACCAAAAGTTGGGGAACTTTTCCGAATATCTACTGCTACATC 1270 Query 25669 ATAAACTTCACCACGAACACAGCGTACCAACTTCCCTTGTGGGTTTTTCTTTTGAAAATG 25728 | ||||||| || | || | | | || ||||| | | || ||||| |||| Sbjct 1271 AAAAACTTCTCCTAGGACTACCCTAAGTAGTTTACCTTGGGTTTGTTGAATTTGATAATG 1330 Query 25729 AAGCCCACGTAGAACTCCTCGGATAGAACGTGAATGGTTATCTTGGACAAAGT 25781 || || || | |||||| | |||| || ||||| || ||||| ||||||| Sbjct 1331 GAGACCCCGCAACACTCCTTGACTAGACCGAGAATGATTGTCTTGTACAAAGT 1383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451847376267840