Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq779316 174 5e-38 seq3945315 167 7e-36 >seq779316 Length=1885 Score = 174 bits (192), Expect = 5e-38 Identities = 299/434 (69%), Gaps = 0/434 (0%) Strand=Plus/Minus Query 188758 AAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACA 188817 ||||| ||| |||| || | || || ||||| | |||||||| | | || || | Sbjct 1344 AAATCGAATATTCTACTAATGGGACCGACTGGATGTGGTAAAACTCTCCTAGCAGAATCT 1285 Query 188818 TTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCT 188877 ||||| | | | |||| || | || | ||||||| ||| | | ||||||||| Sbjct 1284 CTGGCTAAACTCCTGGATGTTCCGTTTGCGGTGGCTGATGCTACTACGCTGACAGAAGCT 1225 Query 188878 GGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTAC 188937 || ||||| || || ||||| ||||| | | || || || | || | |||||||| Sbjct 1224 GGCTATGTGGGAGATGATGTAGAAAATATCCTACTGCGGTTGCTACAGGTAGCTGATTTT 1165 Query 188938 GATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGA 188997 ||||||||| ||| | | |||||| | ||||| || ||| | ||||||||||| | Sbjct 1164 GATATCGAAGCAGCACAGCAGGGAATTATCTATATAGACGAAATTGATAAAATTGCCCGC 1105 Query 188998 AAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTA 189057 ||| |||| || || || |||||||| || ||||| ||||| ||||| |||||| | Sbjct 1104 AAAAGTGAAAATACCTCTATCACCCGAGACGTTTCTGGGGAAGGGGTACAACAAGCTCTG 1045 Query 189058 TTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCT 189117 || |||||| | ||||| || || | || || || || ||||| || | || ||||| Sbjct 1044 TTGAAAATCTTAGAAGGAACTGTGGTTAATGTGCCACCCCAAGGGGGAAGGAAGCACCCC 985 Query 189118 CACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTT 189177 | ||||| | | |||| ||||| | || || ||||||| || || || ||| Sbjct 984 TATCAAGATTTTATCCAAATTGATACGAGCAAGATTCTGTTTATCTGCGGCGGTGCTTTT 925 Query 189178 GATGGTCTTGAAAA 189191 | ||||| || || Sbjct 924 GTGGGTCTCGATAA 911 >seq3945315 Length=661 Score = 167 bits (184), Expect = 7e-36 Identities = 241/340 (71%), Gaps = 0/340 (0%) Strand=Plus/Plus Query 188756 AAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAA 188815 ||||||| ||| || | || |||| || ||||| | |||||||| |||| || ||| Sbjct 321 AAAAATCCAATATTTTGCTAATTGGTCCCACTGGGTGCGGTAAAACTCTATTGGCGGAAA 380 Query 188816 CATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAG 188875 | | ||| | ||| | |||| || | || || |||| || || | | || || | Sbjct 381 CTCTCGCTAAAATGCTGGATGTTCCCTTTGCGGTCGCTGACGCTACCACCCTCACTGAGG 440 Query 188876 CTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATT 188935 | |||||||| || |||||||| ||||| | | || || | | |||| ||||||| Sbjct 441 CGGGTTATGTTGGGGAAGATGTAGAAAATATCCTCCTGCGACTCCTACAAGTGGCTGATT 500 Query 188936 ACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTA 188995 ||| | ||| ||| | || || ||||| |||||||||||| | ||||||||||| Sbjct 501 TTGATGTGGAAGAAGCCCAGCGCGGCATTGTCTATATCGATGAAATCGATAAAATTGCCC 560 Query 188996 GAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTT 189055 | || |||| | | |||||||| ||||||| || || ||||| || |||||||| | Sbjct 561 GTAAGAGTGAAAACCCCTCCATTACTAGAGATGTCTCCGGTGAAGGTGTCCAGCAAGCGT 620 Query 189056 TATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCC 189095 |||||||||| | || || || ||| || |||||||| Sbjct 621 TATTAAAAATGCTGGAGGGAACTACTGCTAATGTTCCTCC 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510971923492736