Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq577692 324 4e-84 seq3816217 269 8e-68 seq3751544 201 3e-47 >seq577692 Length=2825 Score = 324 bits (358), Expect = 4e-84 Identities = 485/689 (70%), Gaps = 0/689 (0%) Strand=Plus/Plus Query 19514 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 19573 ||||| || || ||||| ||||| |||||||| || |||||||| | ||||||| || Sbjct 183 TGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCCT 242 Query 19574 TGTCTCCTTGCAGCCACCATCTGCTTCATTATTGCATTCATTGCGGCTCCACCAGTTGAC 19633 | || | ||||||||||| || | | || || | || || || || || || Sbjct 243 ACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGAT 302 Query 19634 ATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCG 19693 ||||| ||||||||||||||||| |||||| || | || || || |||||||| | Sbjct 303 ATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCACC 362 Query 19694 GGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCT 19753 | || || || || || ||||| || || | ||||| || || || |||||||| Sbjct 363 GCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGCG 422 Query 19754 AGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTC 19813 ||||||||||||| || ||||| || || | ||| | | || ||||||||| Sbjct 423 GCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACTTC 482 Query 19814 CTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATG 19873 || || ||||| | | || ||||| || ||||||||||| ||||| |||||||| Sbjct 483 CTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAATG 542 Query 19874 AGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTC 19933 | ||||||||| |||||| || ||||| || || || || | ||||| | | Sbjct 543 CGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGTTA 602 Query 19934 GTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACG 19993 || || | | ||||| ||| || || |||| | | || |||| || || || || Sbjct 603 GTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCACA 662 Query 19994 TTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATG 20053 || |||| ||||| || | ||||| || ||||| || | |||||||| ||||| ||| Sbjct 663 TTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATATG 722 Query 20054 CTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTT 20113 || || || |||||||| || ||||| | || ||| || ||||||||||| || || Sbjct 723 CTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCACGGTTCTCTGGTG 782 Query 20114 ACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTT 20173 || || || | || ||||| || |||||| ||||| || ||| ||||| ||| Sbjct 783 ACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGGGGTTATCGCTTT 842 Query 20174 GGGCAAGAAGAAGAGACCTATAACATCGT 20202 || ||||||||||| || |||||||| || Sbjct 843 GGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 269 bits (298), Expect = 8e-68 Identities = 257/329 (78%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 20012 TTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTA 20071 |||||||| ||||| ||||| || |||||||| ||||| ||| | || || ||||||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 20072 TTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGT 20131 |||||||| | | ||| |||||||||||||| | || || || || | |||||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 20132 GAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACC 20191 || || || ||| ||| ||| ||||| |||||||| || || ||||||||||| ||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 20192 TATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTC 20251 || ||||| || || ||||| |||||||| || || ||||||||||||| ||||||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 20252 AACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTC 20311 ||||| |||||||| || ||||||||| | | ||| |||||||| | || || |||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 20312 GCTGCCTTGGGCGTTTCTACAATGGCGTT 20340 | || || || || || || ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 201 bits (222), Expect = 3e-47 Identities = 214/280 (76%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569 || |||||| || || ||||||||||| |||||||| || ||||| || |||||||| Sbjct 3 TAGCTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGAT 62 Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGCTTCATTATTGCATTCATTGCGGCTCCACCAGT 19629 || || || | || |||||||||| ||| || || || || || ||||| || || Sbjct 63 CCCTACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGT 122 Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689 |||||||| || ||||||||||||||| | ||| || | || || ||||||||||| Sbjct 123 GGACATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCAT 182 Query 19690 ATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGA 19749 || || || || ||||| | |||||| ||||| || ||||||||||| |||||||| Sbjct 183 CTCTGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGA 242 Query 19750 AGCTAGTTCACTT-GATGAATGGCTCTACAACGGGGGACC 19788 ||| || ||| |||||||||||||||||||| || || Sbjct 243 AGC-AGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141815488553556