Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq577692 318 2e-82 seq3816217 260 4e-65 seq3751544 190 6e-44 seq3509123 105 2e-18 seq3172301 87.8 5e-13 >seq577692 Length=2825 Score = 318 bits (352), Expect = 2e-82 Identities = 489/694 (70%), Gaps = 10/694 (1%) Strand=Plus/Plus Query 28642 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 28701 ||||| || || ||||| ||||| |||||||| || |||||||| | ||||||| || Sbjct 183 TGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCCT 242 Query 28702 TGTCTCCTTGCAGCCACCATCTGCTTCATTATTGCATTCATTGCGGCACCACCAGTTGAC 28761 | || | ||||||||||| || | | || || | || ||||| || || || Sbjct 243 ACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGAT 302 Query 28762 ATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCG 28821 ||||| |||||||||||||| || | || ||| | || || || |||||||| | Sbjct 303 ATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCACC 362 Query 28822 GGAGCCGTCGTACCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCT 28881 | || || ||||| || ||||| || || | ||||| || || || |||||||| Sbjct 363 GCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGCG 422 Query 28882 --AATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACT 28939 || | ||||||||||||| || ||||| || || | ||| | | || ||||||| Sbjct 423 GCAAATA--TTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACT 480 Query 28940 TCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAA 28999 |||| || ||| | | | || ||||| || ||||||||||| ||||| |||||| Sbjct 481 TCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAA 540 Query 29000 TGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCC 29059 || | || |||||| ||| || || ||||| || || || || | ||||| | Sbjct 541 TGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGT 600 Query 29060 TCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCA 29119 | || || | ||||||||||||||||| || | | || |||| ||||| |||| Sbjct 601 TAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCA 660 Query 29120 CCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACA 29179 | || |||| ||| | ||| | ||||| || ||||| || | |||||||| ||||| | Sbjct 661 CATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATA 720 Query 29180 TGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTG 29239 ||||||| || ||||| || || |||||| | || || || ||||||||||| || | Sbjct 721 TGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCACGGTTCTCTGG 780 Query 29240 TCACGTCCTCGCTTGTGCGTGAGACGACTGAA---GACATCTCTCAGAACTATGGTTACA 29296 | || || || | || ||||| || |||||| || | | || ||| ||||| Sbjct 781 TGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGC---CAAAACCGGGGTTATC 837 Query 29297 AGTTTGGACAAGAAGAAGAGACTTATAACATCGT 29330 ||||||||||||||||| ||||||||||| || Sbjct 838 GCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 260 bits (288), Expect = 4e-65 Identities = 255/329 (78%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 29140 TTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTG 29199 |||||||| ||||| ||||| || |||||||| ||||| ||| |||| |||||||| || Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 29200 TTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGT 29259 |||||||| | | || || ||||||||||| | || || || || | |||||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 29260 GAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACT 29319 || || || ||| | ||||| ||||| |||||||| || || ||||||||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 29320 TATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTC 29379 || ||||| || || |||||||||||||| || || ||||||||||||||||||||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 29380 AATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTC 29439 || || |||||||| || ||||||||| | | ||| |||||||| | || || |||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 29440 GCTGCCTTGGGCGTTTCTACAATGGCGTT 29468 | || || || || || || ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 190 bits (210), Expect = 6e-44 Identities = 213/281 (76%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 || |||||| || || ||||||||||| |||||||| || ||||| || |||||||| Sbjct 3 TAGCTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGAT 62 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGCTTCATTATTGCATTCATTGCGGCACCACCAGT 28757 || || || | || |||||||||| ||| || || || || || || || || || Sbjct 63 CCCTACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGT 122 Query 28758 TGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCAT 28817 |||||||| || ||||||||||| || ||||| ||| | || || ||||||||||| Sbjct 123 GGACATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCAT 182 Query 28818 ATCGGGAGCCGTCGTACCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGA 28877 || || || || || || | |||||| ||||| || ||||||||||| |||||||| Sbjct 183 CTCTGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGA 242 Query 28878 AGCTAATTCA-CTT-GATGAATGGCTCTACAACGGGGGACC 28916 ||| | || ||| |||||||||||||||||||| || || Sbjct 243 AGC--AGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3509123 Length=199 Score = 105 bits (116), Expect = 2e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 29476 AACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGG 29535 |||||||| ||||| ||||| || | | ||| || ||||| || |||| || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 29536 GCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCAT 29595 |||||||| |||| ||||||||||| || | ||||||||||| ||||| || ||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 29596 AACTTCCCACTTGATCTGGCT 29616 |||||||| | ||| | ||| Sbjct 121 AACTTCCCCTTAGATTTAGCT 141 >seq3172301 Length=157 Score = 87.8 bits (96), Expect = 5e-13 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 |||||| | || ||||| || || || ||| || || || || || || ||| || Sbjct 143 GGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCTGCTAGTGCAGTA 84 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCA 29115 ||| | ||||||| |||| ||||||||||| ||||| |||||| ||||||| || Sbjct 83 TTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCTCTGGGTATCTCC 24 Query 29116 GGCACCTTCAACTACATGCTGGT 29138 || || ||||||| |||| |||| Sbjct 23 GGAACTTTCAACTTCATGTTGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139754225781572