Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq456579 154 2e-31 seq805419 87.8 2e-11 >seq456579 Length=1737 Score = 154 bits (170), Expect = 2e-31 Identities = 362/536 (68%), Gaps = 14/536 (3%) Strand=Plus/Plus Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838 ||| |||||||| | || | ||||| || |||||||| | | ||||| || |||| Sbjct 533 TGGAAAATGTACAAGCGAG-CGGAGGCTTCTTTTTGGACGACGGCTGAGGTTGATCTCGC 591 Query 1455839 CGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGT 1455898 | || | ||| |||| || | |||| |||| |||||||| ||| | Sbjct 592 CAAAGATAAACCCCATTGGGAAAGTCTCAATGACGGCGAGAAATATTTCATCTCCCACAT 651 Query 1455899 CCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTA 1455958 |||||||||||| ||| | ||||| || ||||| | ||| || ||||| || ||| Sbjct 652 CCTCGCCTTTTT-CGCGGGAAGCGACGGGATCGTTGTCGAAAATCTGGCGACACGGTTTT 710 Query 1455959 TGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAA 1456018 | || ||||| | ||||| || || || ||||||||||| |||||| || |||| Sbjct 711 GTAGGGAAGTCCAGATTCCAGAAGCGCGGTTCTTTTACGGGTTTCAGATCATGATGGAAA 770 Query 1456019 ACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGA 1456078 |||||||||| |||| ||| || || || || |||||| || |||| | || || Sbjct 771 ACATCCACTCGGAAATGTACGGCCTTCTCATAGATACCTACATCCAGGATTC--ACGCGA 828 Query 1456079 AGGACCACCTCTTTCGC---GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 | || | | || | | || || || || | || |||||| || || ||||||| Sbjct 829 AAAACGATAT-TTGCTCAAAGCGATTGAAACTATTCCCGCGGTGAAAAAGAAAGCCGACT 887 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTT-GCCGAGCGGCTCGTCGGCT 1456194 |||| ||| ||||| ||| || | | | | |||| ||| | | ||||||| | Sbjct 888 GGGCCCTGAGATGGAT---CAATGATAGTCGAGCCTCTTTCGCCACGAGACTCGTCGCTT 944 Query 1456195 TTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 | ||| |||||| || || || || || || ||| ||| || || ||| | |||| Sbjct 945 TCGCCATCGTCGAAGGAATTTTCTTTTCCGGATCGTTCGCCGCGATATTCTGGTTGAAGA 1004 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 | | || || |||||||||| | ||| ||||||| | ||||| |||||||| Sbjct 1005 AAAGGGGTCTGATGCCCGGTC-TGACCTTCTCCAACGAACTCATCAGCCGCGACGA 1059 >seq805419 Length=1311 Score = 87.8 bits (96), Expect = 2e-11 Identities = 88/109 (81%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 1456185 CTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC-ATCTT 1456242 || || | ||||||||| ||||||||||||||||| ||||| || || |||| | || || Sbjct 1228 CTGGTGGCCTTTGCCGCTGTCGAGGGCATCTTTTTTTCGGGAAGCTT-TGCGGCGATATT 1170 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGA 1456291 ||||||||||| ||||| ||| |||| |||| | | |||| |||||| Sbjct 1169 CTGGCTCAAGAAACGCGGTCTCGTGCCGGGTC-TGTCCTTTTCCAACGA 1122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6795063107397684