Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3695667 87.8 2e-12 seq396905 86.0 5e-12 >seq3695667 Length=253 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | ||||| ||||| ||| | ||| |||||| || |||||||| |||| | Sbjct 128 CCACCGCGAAGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 69 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 | || || | || ||||||||||| || ||||| |||| || ||||||||| Sbjct 68 AGTGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTC 16 >seq396905 Length=1799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | ||| || | ||| | || || || || || |||||||| || | Sbjct 1223 TTCCACCACGAAGGCGCAAAACAATATGGATTGTGCTTTCTTTCTGTATGTTGTAGTCAG 1164 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || |||||| || | || ||||| | ||| ||||| || || ||||||||||| | || Sbjct 1163 ACAGGGTTCGGTCATTTTCAAGCTGATCACCAGCAAAGATAAAACGCTGCTGGTCTGGAG 1104 Query 35628 GAACGCTCTCCTTGTCCATGATCTT 35652 ||| | ||||||||| ||||| Sbjct 1103 GAATACCTTCCTTGTCCTGTATCTT 1079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428994717419748