Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq577692 450 2e-121 seq856283 340 2e-88 seq3816217 333 3e-86 seq3751544 260 2e-64 seq3654882 141 1e-28 seq940596 129 7e-25 seq658184 122 1e-22 seq2226574 104 3e-17 seq3509123 98.7 1e-15 >seq577692 Length=2825 Score = 450 bits (498), Expect = 2e-121 Identities = 524/707 (74%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 177840 TGGGAATCATTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 177899 |||||| || ||| |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 177900 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGTTTCATCGTCGCCTTCGTC 177959 || | ||||||| || || || | | || || |||||||| | | || || || Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 177960 GCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 178019 ||||| || |||||||| || ||||||||||| |||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 178020 GGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTC 178079 ||||| ||||||||| | | || ||||| || ||| || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 178080 TATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 178139 ||||||||||||||||| ||| ||||||| ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 178140 CTCGTAGTATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTT 178199 | | || || |||||||| || || || | | || ||||| |||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 178200 TCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCA 178259 || || || ||||| ||||| || ||||| ||| || || ||||| ||||| || Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 178260 GCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCA 178319 || |||| ||| | | || ||| || ||||||||||||| |||||||| | | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 178320 CTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTG 178379 || || || ||||| ||||| |||| ||| | || | |||||||| || || || | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 178380 ATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCA 178439 |||||||||||||| ||| |||| || || ||||| || ||||| | || ||| || Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 178440 ATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAG 178499 |||||||||||| |||| |||||||| | || |||||||| ||||||| ||| || Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 178500 AACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGT 178546 ||| |||||| || |||||||||||||| || || ||||| || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 340 bits (376), Expect = 2e-88 Identities = 438/602 (73%), Gaps = 2/602 (0%) Strand=Plus/Minus Query 179221 GGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTG 179280 |||| |||||||| || |||||| | || || ||||| || || |||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 179281 GACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTT 179340 | |||| ||| | ||| || ||||| | || || || ||| | || || || | | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 179341 TTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTC 179400 ||||||| ||||||||||||||| || || |||||||| || || ||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 179401 TTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGG 179460 | || || || ||| || || ||| | | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 179461 GTCCTGAGTCTCAG-GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTC 179519 |||| || ||||| |||| ||| | || ||||||||| | ||||| | ||| ||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACC-CGCTGGTGCCAATTAGGGGGTTTATGGGCTTTT 782 Query 179520 GTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCT 179579 || || || || || || ||||| || ||||| ||| || | || || ||| | || Sbjct 781 GTAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCC 722 Query 179580 CGCCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTC 179639 || || |||| || | ||||| |||||||| ||||| | || |||||||| || ||| Sbjct 721 CGGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTC 662 Query 179640 GTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTT 179699 || || || ||| | || || || ||||| || || ||||| || || || |||| Sbjct 661 GTGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTT 602 Query 179700 GGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTC 179759 ||||| || | |||||| |||| | || ||| | || || |||||||||||||||||| Sbjct 601 GGTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTC 542 Query 179760 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATC 179819 ||||||||||| |||||||||||||| || || || || || || || ||| ||||||| Sbjct 541 AACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATT 482 Query 179820 CA 179821 || Sbjct 481 CA 480 Score = 123 bits (136), Expect = 3e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 179849 TGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGAC 179908 |||||| |||||| | | || ||||| || ||||| | || || | ||||| || Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 179909 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAA 179968 || || ||||| || || |||||||||||||| ||||| ||||||||||| ||||| || Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 179969 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA 180021 ||| || ||| | || || |||||| ||||||| ||||| | || || |||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGA 248 >seq3816217 Length=329 Score = 333 bits (368), Expect = 3e-86 Identities = 271/329 (82%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 178356 TTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTA 178415 |||||||||||||||||||| ||||||||||||||||| |||||||| || || |||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 178416 TTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGT 178475 ||||||||| | ||||| || ||||||||||||||||| || ||||| | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 178476 GAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACA 178535 ||||| || |||| ||||| || ||||| ||||| || ||||| ||||||||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 178536 TACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTC 178595 |||||||| || ||||| || || ||||||||||| ||||||||||||||||||| ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 178596 AACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTC 178655 |||||| ||||| |||||||||||| | | || ||||| ||| | || ||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 178656 ACCGCACTGGGCGTAAGCACCATGGCATT 178684 ||||| | || ||| ||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 260 bits (288), Expect = 2e-64 Identities = 226/277 (82%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 177858 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177917 |||||||| || ||||| |||||||| ||||| || |||||||| || |||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 177918 ACTCTGTTGGCAGCAACTATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGAC 177977 || || | | || || ||||| | |||| |||| || ||||||||||||| |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 177978 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCT 178037 || ||||| ||||| |||||||| |||||||| || |||| |||||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 178038 GGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 178097 ||||| |||||||| || ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 178098 GCATCA-CTT-GATGAGTGGCTGTATAACGGTGGTCC 178132 || || ||| ||||| ||||| || |||||||| || Sbjct 247 GC--CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 179849 TGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGAC 179908 |||||| |||||| | | || ||||| || ||||| |||| || | ||||| || Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 179909 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAA 179968 ||||| ||||| || || |||||||| ||||| || || ||||||||||| ||||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 179969 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTC 180028 ||| || ||| | || || |||||| |||| || || || | ||||| |||| | || Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 180029 TATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGT 180076 || || | | ||||| ||| | ||||| |||||||| || ||||| Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGT 9 >seq940596 Length=2461 Score = 129 bits (142), Expect = 7e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 176331 TGTGAGGATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTAC 176390 || || |||||| ||||| || || ||||| |||||||| || ||||| | ||| Sbjct 1394 TGCGATGATGATACATATATTCTCGATGCTGCCGAAGAAGCTGGACTAGATCTGCCCTAC 1335 Query 176391 TCTTGTCGTGCTGGTGCTTGTTCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGAT 176450 || || |||||||||||||| || | |||||||| | | | |||||| | |||| Sbjct 1334 TCCTGCCGTGCTGGTGCTTGCTCCACCTGTGCTGGTACAATCACCAGTGGTACCATTGAC 1275 Query 176451 CAGAGTGATCAGTCTTTCCTGGATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGC 176510 ||| ||||||||||||| | ||||||||||| || ||| |||| | | || ||||||| Sbjct 1274 CAGTCTGATCAGTCTTTCTTAGATGATGATCAGATCGAAGCTGGGTATGTTTTGACTTGT 1215 Query 176511 GTATCTTATCCTAC 176524 ||| | ||||| || Sbjct 1214 GTAGCCTATCCCAC 1201 >seq658184 Length=760 Score = 122 bits (134), Expect = 1e-22 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 179221 GGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTG 179280 |||| |||||||| || |||||| | || || ||||||||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 179281 GACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTT 179340 | |||| ||| | ||| ||| ||||| | || ||||| ||||| || || || | | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 179341 TTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTA 179380 ||||||| ||||||||| ||||| || || |||||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 >seq2226574 Length=116 Score = 104 bits (114), Expect = 3e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 179739 GGTTTCCACAACTGGACGCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGA 179798 || |||||||||||||| || ||||||||||| |||||||||||||| || || || || Sbjct 2 GGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGGC 61 Query 179799 GGAGCACTGCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACATTGTATGAAG 179853 || || || || ||||||| ||||| | ||| ||||| || || ||| ||||| Sbjct 62 GGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq3509123 Length=199 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 178692 AATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGG 178751 || || |||||||||||||| ||| | | ||| || || || | ||||| ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 178752 GCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCAC 178811 || || || ||||||| || || || |||||||| ||||||||||||||||| ||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 178812 AACTTCCCGCTTGATCTTGCAGCAGCTGAGTCCACACCTGTGGCCTTAATTGCTCCT 178868 |||||||| | ||| | || | |||||||| ||||| || || |||| ||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCT 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575949387656160