Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq577692 450 1e-121 seq856283 354 9e-93 seq3816217 315 7e-81 seq3751544 255 6e-63 seq3654882 129 6e-25 seq3172301 122 9e-23 seq3509123 118 1e-21 seq2226574 111 2e-19 seq940596 95.1 1e-14 >seq577692 Length=2825 Score = 450 bits (498), Expect = 1e-121 Identities = 524/707 (74%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 158370 TGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 158429 |||||| || ||| |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 158430 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCCTTCGTC 158489 || | ||||||| || || || | | || ||||||||||| | | || || || Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 158490 GCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 158549 ||||| || |||||||| || ||||||||||| |||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 158550 GGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTC 158609 || || ||||||||| | | || |||||||| ||| || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 158610 TATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 158669 ||||||||||||||||| ||| ||||||| ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 158670 CTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTT 158729 | | || || |||||||| |||||||| | | |||||||| ||||| |||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 158730 TCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCA 158789 || || || ||||| ||||| || ||||| ||| || ||| || || || ||||| Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 158790 GCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCT 158849 || | || ||| | | || ||| || |||||||||||||||| || |||| | | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 158850 CTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTT 158909 || || || ||||| || ||||||| ||| | || | |||||||| || || | | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 158910 ATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCT 158969 |||||||| ||||||||||| || || ||||| || || ||||| |||||||||| ||| Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 158970 ATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAG 159029 ||||| || ||| || || || || | || |||||||| ||||||| || || Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 159030 AACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGT 159076 ||| ||||| || ||||||||||||||||| ||||| || || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 354 bits (392), Expect = 9e-93 Identities = 439/601 (73%), Gaps = 0/601 (0%) Strand=Plus/Minus Query 159897 GGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTG 159956 ||||||| | ||||| |||||||| || || ||||| ||||| ||||| || ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 159957 GACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTT 160016 | | || ||| | ||| || ||||| |||| || || ||| | || ||||| || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 160017 TCGCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTC 160076 | | || ||||| ||||| |||||||| |||||||| || || ||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 160077 TTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGG 160136 | || || | || ||||| || ||| || | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 160137 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTG 160196 |||| || ||||| |||| || | | ||| |||| | ||||| | ||| ||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 160197 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 160256 | || || ||||| || ||||| || ||||| ||| || |||||||| ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 160257 GTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTTG 160316 | | | || || |||||||| ||||| || || ||| | || |||||||| || || | Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 160317 TCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTG 160376 | ||||||||| | || ||||| |||||||| || | ||||| || ||||| ||||| Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 160377 GGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTTA 160436 | || |||| ||||| | || | | ||| | |||||||| |||||||||||||| | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 160437 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATCC 160496 |||||||||| |||||||||||||| || || || || || || || ||| |||| || | Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 160497 A 160497 | Sbjct 480 A 480 Score = 123 bits (136), Expect = 3e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 160525 TGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGAC 160584 |||||| |||||| | | || ||||| || ||||| | || || | ||||| || Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 160585 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAA 160644 || || ||||| || || |||||||||||||| ||||| ||||||||||| ||||| || Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 160645 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGA 160697 ||| || ||| | || || |||||| ||||||| ||||| | || || |||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGA 248 >seq3816217 Length=329 Score = 315 bits (348), Expect = 7e-81 Identities = 267/329 (81%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 158886 TTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTA 158945 ||||||||||||||||||||||| |||||||| ||||||||| | || |||||||| ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 158946 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGT 159005 |||||||| || | ||||| || ||||| || | | || ||||| || | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 159006 GAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACA 159065 ||||| || |||| || || || ||||| |||||||| ||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 159066 TATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTC 159125 || || || || ||||| || |||||||||||||| ||||||||||||| ||||| ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 159126 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTC 159185 |||||| ||||||| ||||||||||| | | ||| ||||| || |||||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 159186 ACCGCCCTTGGCGTGTCAACCATGGCATT 159214 ||||| | || || || |||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 255 bits (282), Expect = 6e-63 Identities = 225/277 (81%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 158388 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 158447 |||||||| || ||||| |||||||| ||||| || |||||||| || |||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 158448 ACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGAC 158507 || || | | || |||||||| | |||| |||| || ||||||||||||| |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 158508 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 158567 || ||||| ||||| |||||||| |||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 158568 GGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 158627 ||||| ||||| || || ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 158628 GCATCA-CTT-GATGAGTGGCTGTATAACGGTGGTCC 158662 || || ||| ||||| ||||| || |||||||| || Sbjct 247 GC--CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 160525 TGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGAC 160584 |||||| |||||| | | || ||||| || ||||| |||| || | ||||| || Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 160585 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAA 160644 ||||| ||||| || || |||||||| ||||| || || ||||||||||| ||||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 160645 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCAG 160704 ||| || ||| | || || |||||| |||| || || || | ||||| |||| | Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 160705 TATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTG 160753 || || | | ||||| ||| | || || |||||||| || |||||| Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTG 8 >seq3172301 Length=157 Score = 122 bits (134), Expect = 9e-23 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 158730 TCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCA 158789 || |||||||| || ||||| || |||||||| ||||| || ||||| || || || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 158790 GCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCT 158849 || ||| |||||| | |||| || |||| ||||||||||||||||| | ||||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 158850 CTTGGTATCTCTGGTACTTTTAACTACATG 158879 || |||||||| || ||||| |||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq3509123 Length=199 Score = 118 bits (130), Expect = 1e-21 Identities = 121/156 (78%), Gaps = 8/156 (5%) Strand=Plus/Plus Query 159222 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTC---AG-GGTCGTGTGTTGAACAC 159277 |||||||||||||||||||| |||| | |||| | || ||||| || | ||||| Sbjct 1 AACGGTTTCAACTTCAACCA----ATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACAC 56 Query 159278 CTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 159337 |||||| ||||| | ||||| || |||||||||||||| ||||| ||||| ||||| Sbjct 57 CTGGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGC 116 Query 159338 ACACAACTTCCCACTCGACCTTGCTGCTGCTGAGTC 159373 ||||||||||| | || | ||| |||||||||| Sbjct 117 TCACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 >seq2226574 Length=116 Score = 111 bits (122), Expect = 2e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160414 AGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGG 160473 |||||| ||||||||||| || ||||||||||| |||||||||||||| || || || || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 160474 AGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAG 160529 || || || || |||| || ||||| | ||| ||||| ||||| |||| ||||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq940596 Length=2461 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 159522 ACCATCCCTTGTGAAGCGGACCAATACATTTTAGACGCTGCTGAGGAAGCAGGTGTAGAT 159581 |||||| ||| || | || ||| ||| | || ||||| || ||||| || ||||| Sbjct 1403 ACCATCGATTGCGATGATGATACATATATTCTCGATGCTGCCGAAGAAGCTGGACTAGAT 1344 Query 159582 GCTCCGTATTCATGTCGTGCTGGTGCTTGTAGCACATGTGCTGGTAAGATTGAGAGCGGG 159641 || || || || |||||||||||||| ||| |||||||||| || || || Sbjct 1343 CTGCCCTACTCCTGCCGTGCTGGTGCTTGCTCCACCTGTGCTGGTACAATCACCAGTGGT 1284 Query 159642 ACAGTTGACCAAAGTGACCAATCTTTCTTGGACGATGATCAACTCGCTGAAGGATTTCTT 159701 || ||||||| ||| || |||||||| || |||||||| ||| | || | | || Sbjct 1283 ACCATTGACCAGTCTGATCAGTCTTTCTTAGATGATGATCAGATCGAAGCTGGGTATGTT 1224 Query 159702 CTCACTTGTGTCTCCTACCCTACATCAGAC 159731 | |||||||| |||| || || || ||| Sbjct 1223 TTGACTTGTGTAGCCTATCCCACCTCCGAC 1194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525068961970560