Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq577692 513 2e-140 seq856283 338 7e-88 seq3816217 297 2e-75 seq3751544 235 6e-57 seq3654882 147 3e-30 seq3172301 131 2e-25 seq3509123 120 4e-22 seq658184 109 6e-19 seq940596 98.7 1e-15 seq2226574 95.1 1e-14 seq1238013 84.2 3e-11 >seq577692 Length=2825 Score = 513 bits (568), Expect = 2e-140 Identities = 538/707 (76%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 178852 TGGGAACAGTTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTC 178911 ||||||||||| ||| |||||||| || ||||| || || | ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 178912 GGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGTTTCATCGTTGCTTTCGTA 178971 ||| | ||||||| ||||| ||||| |||| || |||||||| | | ||||| ||| Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 178972 GCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 179031 || |||||||| || ||||||||||||||||| |||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 179032 GGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTC 179091 || || ||||||||| | | |||||||| || ||||| || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 179092 TACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 179151 || |||||||||||||| ||| | ||||| ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 179152 CTGGTAGTCTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTT 179211 || | || ||||||||||| |||||||| | | ||||||||| |||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 179212 TCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCT 179271 ||||| || |||| |||||||| ||||| |||||| || || || || |||||| Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 179272 GCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCT 179331 |||| || ||| | | || ||| || |||||||||||||||| ||||||| | | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 179332 CTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTT 179391 || || || ||||| || ||||||| ||| | || | |||||||| || || | | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 179392 ATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCT 179451 |||||||| ||||||||||| || || ||||| || || ||||| |||||||||| ||| Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 179452 ATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAG 179511 |||||||| ||| || || || || | || |||||||| ||||| | || || Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 179512 AACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGT 179558 ||| |||||| || |||||||||||||| || |||||||| || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 338 bits (374), Expect = 7e-88 Identities = 427/584 (73%), Gaps = 2/584 (0%) Strand=Plus/Minus Query 180019 GGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTG 180078 |||| |||||||| || |||||||| || ||||| || || ||||||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 180079 GACTACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTT 180138 | | || ||| | ||| || ||||| | || || || ||| | || || || | | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 180139 TTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTC 180198 |||| || ||||||||||||||| || || |||||| || |||||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 180199 TTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGG 180258 | || || || ||| || || ||| || | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 180259 GTCCTGAGTCTCAG-GGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAATTTC 180317 |||| || ||||| |||| ||| | || ||||||||| | ||||| | ||| ||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACC-CGCTGGTGCCAATTAGGGGGTTTATGGGCTTTT 782 Query 180318 GTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCA 180377 || || || || || || ||||| || ||||| || || || ||||| ||| | || Sbjct 781 GTAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCC 722 Query 180378 CGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTT 180437 || | |||| || |||||||| ||||| || || ||| | || ||||| || || || Sbjct 721 CGGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTC 662 Query 180438 GTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTT 180497 || |||||||| | || ||||| ||||||| || | ||||||||||||||| ||| Sbjct 661 GTGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTT 602 Query 180498 GGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAACTGGACCCTC 180557 || ||||||| ||||| | || | || || | || || |||||||||||||| ||| Sbjct 601 GGTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTC 542 Query 180558 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGC 180601 ||||||||||| |||||||||||||| || || || ||||| || Sbjct 541 AACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGC 498 Score = 136 bits (150), Expect = 5e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 180647 TGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAAC 180706 |||||| |||||| | | |||||||| || ||||| | || |||| || ||||| Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 180707 TTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAA 180766 ||||| ||||| || || |||||||||||||| ||||| ||||||||||| ||||| || Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 180767 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA 180819 ||| || ||| | || || |||||| ||||||| ||||| | || || |||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGA 248 >seq3816217 Length=329 Score = 297 bits (328), Expect = 2e-75 Identities = 263/329 (80%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 179368 TTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTA 179427 ||||||||||||||||||||||| |||||||| ||||||||| | || |||||||| ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 179428 TTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGT 179487 |||||||| || | ||||| || |||||||| | | || ||||| || | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 179488 GAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACC 179547 ||||| || || | || || || ||||| ||||| || ||||| ||||||||||| ||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 179548 TATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTT 179607 || ||||| || ||||| || || ||||||||||| |||||||||||||||| || || Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 179608 AACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTC 179667 |||||| || || ||||||||||| | | ||| |||||||| |||||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 179668 ACTGCTCTTGGCGTGTCAACCATGGCGTT 179696 || ||| | || || || |||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 235 bits (260), Expect = 6e-57 Identities = 217/275 (79%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 178870 TGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCT 178929 |||||||| ||||||||||| || | ||||| || ||||||||||| |||||||| ||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 178930 ACGTTGCTTGCTGCAACTATCTGTTTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGAT 178989 || | || |||| || ||||| | |||| | ||||| | || || || ||||| || Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 178990 ATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCT 179049 |||||||| ||||| |||||||| |||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 179050 GGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGCA 179109 ||||| ||||| || || || || || ||||| |||||||||||||| ||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 179110 GCATCACTCGATGAGTGGCTGTATAACGGTGGTCC 179144 || | ||||| ||||| || |||||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 147 bits (162), Expect = 3e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 180647 TGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAAC 180706 |||||| |||||| | | |||||||| || ||||| | || |||| ||| ||||| Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 180707 TTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAA 180766 || || ||||| || || |||||||| ||||| || || ||||||||||| ||||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 180767 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTC 180826 ||| || ||| | || || |||||| |||| || || || | ||||| |||| | || Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 180827 TATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTG 180875 || || | | ||||| ||| | ||||| |||||||| || |||||| Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTG 8 >seq3172301 Length=157 Score = 131 bits (144), Expect = 2e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 179212 TCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCT 179271 || ||||| | || |||||||| |||||||| || || ||| ||||| || || ||| Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 179272 GCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCT 179331 || |||||||||||| | |||| || |||| |||||||||||||| || | ||||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 179332 CTTGGTATCTCTGGTACTTTTAACTACATG 179361 || |||||||| || ||||| |||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq3509123 Length=199 Score = 120 bits (132), Expect = 4e-22 Identities = 135/179 (75%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 179704 AACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAA--GGACGTGTCCTTAACACAT 179761 |||||||||||||||||||| ||| | | ||| || | || || || ||||||| | Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGAC--TCCAGCGGTCGGGTAGTTAACACCT 58 Query 179762 GGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCAC 179821 |||| || || | ||||| || ||||||||||||| ||||| ||||| ||||| | Sbjct 59 GGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTC 118 Query 179822 ACAACTTCCCACTCGACCTTGCTGCTGCTGAGTCTACACCTGTAGCACTTGTAGCACCT 179880 |||||||||| | || | ||| ||||||||||| |||||||| | || |||||| Sbjct 119 ACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCT 177 >seq658184 Length=760 Score = 109 bits (120), Expect = 6e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 180019 GGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTG 180078 |||| |||||||| || |||||||| || || || ||||||||||| || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 180079 GACTACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTT 180138 | | || ||| | ||| ||| ||||| | || ||||| ||||| || || || | | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 180139 TTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTA 180178 |||| || ||||||||| ||||| || || |||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 >seq940596 Length=2461 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 177374 TTGTGAAGACGATCAGTACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATATTAATTA 177433 ||| || || ||| || || ||||| || || |||||||| || | ||| | || Sbjct 1395 TTGCGATGATGATACATATATTCTCGATGCTGCCGAAGAAGCTGGACTAGATCTGCCCTA 1336 Query 177434 CTCATGCCGCGCTGGTGCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTAGTGTAGA 177493 ||| ||||| ||||||||||| || |||||||||||| | | ||||||| | || Sbjct 1335 CTCCTGCCGTGCTGGTGCTTGCTCCACCTGTGCTGGTACAATCACCAGTGGTACCATTGA 1276 Query 177494 TCAAAGCGATCAATCGTTCTTGGATGACGATCAAATGGAGTCAGGATTTATTCTGACCTG 177553 || ||||| || ||||| ||||| ||||| || || | || | | || |||| || Sbjct 1275 CCAGTCTGATCAGTCTTTCTTAGATGATGATCAGATCGAAGCTGGGTATGTTTTGACTTG 1216 Query 177554 TGTGTCATATCCCACCAGCGATTG 177577 ||| | ||||||||| ||| || Sbjct 1215 TGTAGCCTATCCCACCTCCGACTG 1192 >seq2226574 Length=116 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 180537 GGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGT 180596 || |||||||||||||| || ||||||||||| |||||||||||||| || || || || Sbjct 2 GGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGGC 61 Query 180597 GGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAG 180651 || || | |||| || || ||||| | || || || ||||| |||| ||||| Sbjct 62 GGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq1238013 Length=100 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 153257 TGGCGGAATTGGTAGACGCGCCAGGTTTAGGTTCTGGTGTCTTTATGACGTGGAGGTTCA 153316 ||||||||||||||||||||| || |||||||||| ||||| | |||||| ||||||| Sbjct 70 TGGCGGAATTGGTAGACGCGCTAGATTTAGGTTCTAGTGTCCTCGCGACGTGAAGGTTCA 11 Query 153317 AGTCCT 153322 |||||| Sbjct 10 AGTCCT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580055100428160