Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq760737 367 2e-96 seq456579 178 2e-39 seq942746 122 1e-22 seq3772600 109 7e-19 seq817554 100 4e-16 seq3953357 95.1 2e-14 seq3718751 91.5 2e-13 seq171851 89.7 7e-13 seq3829556 87.8 2e-12 >seq760737 Length=2966 Score = 367 bits (406), Expect = 2e-96 Identities = 625/899 (70%), Gaps = 23/899 (3%) Strand=Plus/Minus Query 39312 ACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTT 39371 ||||||| || ||||||||| || ||||| | ||| || ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 39372 CCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATC 39431 | | ||| ||||| ||||| || |||||||| || | || | || |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 39432 CTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAAT 39491 | |||||| || | | ||||| ||||||||||| || |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 39492 TCATTCCTATGAGTTTAACTGGTAGAGCCT-CCGTT---AGAAACTCTTTTTCGATGTCT 39547 ||||||| || | |||| || || | ||||| | ||| ||||||||||| || Sbjct 1374 TCATTCCAATCATTTTATTCGG----GCATGCCGTTTCAAAAAAATCTTTTTCGATATCG 1319 Query 39548 ACGGCCTCTGTTATTATCGATGTTACTACCTCAT-----CACTCGGTGGATGCAATAAA- 39601 || || || | | | || || || | || || ||||| || ||| Sbjct 1318 ACTGCGTC----ACCAACAATTTTG-TAAATGATGGATTCATTCGGTTTTTGTTTTAAGC 1264 Query 39602 --TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATT 39659 | | |||||| | ||| | || || ||||||| ||| || |||||| |||||||| Sbjct 1263 ACTCTCTAAACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATT 1204 Query 39660 CGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAA 39719 |||| ||||| |||||||| || | | || | |||||| ||||||||||| ||||| | Sbjct 1203 CGTTTGAAAAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGA 1144 Query 39720 AAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779 | |||||| |||| || ||||||||||| |||||| || | | |||||| | | Sbjct 1143 ATGATCCACAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAATG 1084 Query 39780 TTGTATCATTATGTA-TCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838 ||||| ||| | |||| ||||||||||| ||||| || || ||||| | Sbjct 1083 AGTTATCAG-ATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAAC 1025 Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 ||||| || || ||||| ||| | ||||||||| ||||| | ||| || || ||| Sbjct 1024 GTTTCGATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATT 965 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 |||| ||||||||||| | ||| || ||||| ||||| |||||||| || ||||| ||| Sbjct 964 AACAAGCTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCAT 905 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 || ||| | |||||| || || | |||||| | | | |||||| || || Sbjct 904 TTTATTTCTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATG 845 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078 | |||| | ||||| || || |||| | || || || |||||||| | || Sbjct 844 CAATCAGCATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTT 785 Query 40079 AATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 |||| | |||||| | | ||| |||| || ||| ||||| | | |||||||||| || Sbjct 784 AATTGGTACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAA 725 Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 |||| ||| ||||| ||||| |||| | | | ||||||||||||||| | |||||| Sbjct 724 GCCTGTGCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 178 bits (196), Expect = 2e-39 Identities = 400/599 (67%), Gaps = 9/599 (2%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| ||| || ||||| ||||| |||| |||| || | || || | |||||| || Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || || ||||| ||||| | || || | ||| ||||| || || || ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTG- 39782 |||||||| || ||||| || || || || || |||||| || || || | Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 39783 -TATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTT 39841 ||||||| ||||| || | ||||| || |||||||| || || || || ||| Sbjct 912 CTATCATTG---ATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTT 856 Query 39842 TCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAAC 39901 || || || || | | ||| ||||||| ||| | | || |||||||| | Sbjct 855 TCAATCGCTTTGAGCAAATATCGTTTTTCGCGTGAATCCTGGATGTAGGTATCTATGAGA 796 Query 39902 AGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTT 39961 || | |||||||| || ||||||||||| ||| |||||||| |||||||| | | Sbjct 795 AGGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGC 736 Query 39962 GCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCA 40021 ||||| | ||| || || || |||||| | | ||||| |||||| || || || Sbjct 735 GCTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCG 676 Query 40022 TCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT 40081 || || | || ||||| || | | || || |||||||| || || | | Sbjct 675 TCGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGA 616 Query 40082 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCC 40141 | | ||| | ||||||| | | ||| || || | | |||||||| || ||| Sbjct 615 CTTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCC 556 Query 40142 TCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 || || |||||||| ||||| | ||| |||||||| || ||||| || ||||| Sbjct 555 TCCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 >seq942746 Length=519 Score = 122 bits (134), Expect = 1e-22 Identities = 163/226 (72%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| ||||| || || | ||| || || || || | |||||||| ||||| | ||| | Sbjct 373 CCTCGTCTCTGCTGATGAGTTCATTGGAGAAAGTCAAACCAGGCATAAGACCCCTCTTCT 314 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | ||||| || |||||||||||||| || || |||||||| || ||||| || ||||| | Sbjct 313 TTAGCCAGAAGATGGCAGCAAAAGACCCTGAGAAGAAGATACCCTCTACAGCAGCAAAAG 254 Query 39759 CAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTTCTGTGCCCAATCAG 39815 |||| | ||| || || || | | | ||| | ||||| || ||||||| || | Sbjct 253 CAACCACTCTTTCACCATAGGTGGCATTGTCAGAGTTGATCCAGTTGAGTGCCCAGTCGG 194 Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | |||| || || ||||| ||||| || ||||| || || || Sbjct 193 CCTTCTGTTTGACTGGCGGCATGGTTTCAATTGCATTGAATAGGTA 148 >seq3772600 Length=295 Score = 109 bits (120), Expect = 7e-19 Identities = 114/149 (77%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 39695 TTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCA 39754 ||||| |||||||| ||||| ||||| || || || ||||||||||| |||||||||||| Sbjct 226 TTTTTCAGCCAAAAGATGGCTGCAAAGGACCCCGAGAAGAAGATGCCCTCTACTGCTGCA 167 Query 39755 AATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATGTATCCACTTCTGTGCCCAA 39811 || || ||||||| ||| || | ||| ||| || | |||||| || |||||| Sbjct 166 AACGCCACAAGTCGCTCACCAAACGTTGCATCCTTAGCACCTATCCATTTTATTGCCCAG 107 Query 39812 TCAGCTTTCTTCTTTACACAAGGCATTGT 39840 || ||||| || || ||||| || | ||| Sbjct 106 TCTGCTTTTTTTTTCACACACGGTACTGT 78 >seq817554 Length=629 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 40008 CATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTT 40067 |||| || || || |||||||| ||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 40068 CATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 40127 | | | ||| || | ||||| || || ||||| |||| ||| || ||||| | | Sbjct 325 CGTTGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACCG 384 Query 40128 TCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAA 40187 |||| || || ||||||||||| |||||||| |||| ||||| | |||| || || | Sbjct 385 TCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGGA 444 Query 40188 AAATAACAAA 40197 | | ||||| Sbjct 445 AGACGACAAA 454 >seq3953357 Length=757 Score = 95.1 bits (104), Expect = 2e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || || ||||| || || || || || || || || | |||||| | ||| |||| Sbjct 107 CAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGATG 166 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || || | | || | |||||||| ||| || ||||| |||||||||||||| |||||| Sbjct 167 CCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAAG 226 Query 39737 ATGCCTTCTACTGCTGCAAATGCAA 39761 || ||||| || || |||||||||| Sbjct 227 ATCCCTTCCACGGCGGCAAATGCAA 251 >seq3718751 Length=264 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||||| || |||| ||||||| | || | ||| |||| |||||| || || ||| Sbjct 253 TCGTTAGCGAAAGTGATACCAGGCAAGATTCCTCTCTTCTTGATCCAAAAGATCGCTGCA 194 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCT 39768 || ||||||||||| ||||| || ||||| || ||||| ||||| ||||| Sbjct 193 AACGATCCAGAAAAAAAGATTCCCTCTACAGCAGCAAAGGCAACGAGTCT 144 >seq171851 Length=421 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39929 TCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAA 39988 || ||||| ||||| ||||| || || ||| | ||||||| || || ||||| || | Sbjct 418 TCCATCGCAATCTGGAATCCATAGAAGCATTTGGCTTCAGGAACCTGAACCTCCTGACTA 359 Query 39989 AATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACA 40048 ||||| ||| ||||||||||||| || || ||||| || || || || || || | |||| Sbjct 358 AATCTCTCCACCAAATTTTCATTTACAATACCATCGCTGGCTGCGAAGAAGGCAAGTACA 299 Query 40049 TG 40050 || Sbjct 298 TG 297 >seq3829556 Length=342 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 |||||| || ||||| || |||||| ||| | | || ||||| || || || | Sbjct 106 TCTATCAGCCACAAACTCAATGTATTCAGCCATTAATGCAGCGTTCATCCCGATAAGATC 165 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGA 39567 |||| || || |||||||||||||| || || ||| | |||||||| || || Sbjct 166 GACTGATAAGGCATCCGTTAGAAACTCCTTCTCTATGGCAACGGCCTCCTGGATGATGCT 225 Query 39568 TGTTACTACCTCATCACTCGGTGGATGCAATAAATGT--TTAAACATTAAGCAGGCGAAG 39625 |||| | ||| | || ||| ||| || |||| | || | ||||| || ||| Sbjct 226 GGTTATTCTCTCCTTGCTTGGT--TTGCGATGGATGTGGGTGAATAGCAAGCAAGCAAAG 283 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 ||||| || ||||| ||||||| || || | || ||||| || || || |||||||| Sbjct 284 TCACAGTGGAGGCCTTCATCTCGGCTGATCAGCTCATTAGAGAAGGTAAGACCAGGCAT 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652835702166480