Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq343327 109 6e-19 seq201371 109 6e-19 >seq343327 Length=1519 Score = 109 bits (120), Expect = 6e-19 Identities = 197/286 (69%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || || ||||| | || || ||| | | |||| |||||| || || Sbjct 1155 CGGTCAAACCGTCCCGGACGCAATAGGGCTGTATCCAACACATCAGGGCGATTAGTGGCT 1214 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || || |||| ||| || | | | ||||| |||||||| || |||| | ||||||| Sbjct 1215 GCAATCACAATAATTCCCGGATTACCCTCAAATCCATCCATTTCCGTCAGTAATTGGTTA 1274 Query 9644 ATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCA 9701 | || ||||||||||||||||| ||| | | | || || | ||||| || | Sbjct 1275 AGGGTCTGTTCCCGTTCATCATTACCGCCGCC--AATTCCCGCCCCCCGTTGGCGACCGA 1332 Query 9702 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGA 9761 | |||||||| |||||||| || | | || || ||| || ||| || ||| | Sbjct 1333 CAGCATCAATTTCATCAATAAAAATCAGACAGGGGGAATTATCCTTAGCCTTTTTAAAAA 1392 Query 9762 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 9807 ||||||| || || || || || || ||||||||||||||||| Sbjct 1393 GATCCCGCACCCGGGATGCACCGACCCCCACAAACATCTCCACAAA 1438 >seq201371 Length=2102 Score = 109 bits (120), Expect = 6e-19 Identities = 171/241 (71%), Gaps = 8/241 (3%) Strand=Plus/Minus Query 9571 GCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGT 9630 ||| || || || || || | || ||| || || | | |||||||||||||| || || Sbjct 1819 GCGGTTAGTAGCAGCAATAATAATAATGCCCGTGTTACCCTCAAAACCATCCATTTCAGT 1760 Query 9631 CAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTG 9688 || | ||||||| || ||||| ||||||||||| ||| | | | |||||||| Sbjct 1759 TAATAACTGGTTAAGGGTCTGTTCTCGTTCATCATTACCGCCGCC--AATACCAGCACCA 1702 Query 9689 CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGA 9748 || || || || |||||||| |||||||| |||||||| || || | |||| | Sbjct 1701 CGCTGGCGACCGACCGCATCAATTTCATCAATAAAGACGATACAGGGGGCAGTTTCCTTA 1642 Query 9749 GCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAA 9806 || |||| ||| | ||| || || | || || || ||||||||||||||||||| Sbjct 1641 GC--CTTCTTAAACAAATCGCGGACCCTGGAAGCCCCAACCCCAACAAACATCTCCACAA 1584 Query 9807 A 9807 | Sbjct 1583 A 1583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554329008325680