Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq760737 233 6e-56 seq559689 145 2e-29 seq396905 134 4e-26 seq3530745 113 1e-19 seq3148421 111 5e-19 seq3747720 109 2e-18 seq809212 109 2e-18 seq564260 105 2e-17 seq215353 93.3 1e-13 seq3818713 91.5 4e-13 seq1104584 91.5 4e-13 seq650275 87.8 5e-12 seq3830724 84.2 6e-11 >seq760737 Length=2966 Score = 233 bits (258), Expect = 6e-56 Identities = 398/574 (69%), Gaps = 5/574 (1%) Strand=Plus/Minus Query 223714 ATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACC 223773 |||||| | || ||||| || |||||||| |||||||| || | ||| || | || || Sbjct 1232 ATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAAAAGTGAGTCCTGGAAGCAACCC 1173 Query 223774 TCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACA 223833 ||||||||||| ||||||||| || || | ||| ||||||| || ||||||||||| Sbjct 1172 TCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCACAAAAAAAAATGCCTTCTACACA 1113 Query 223834 AGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGC 223893 ||||| || | ||| | |||||| ||| | | | | ||||| ||| || Sbjct 1112 TGCAAAAGCGATTAACCTCTCTGCAAA---TGAGTTATCAGATGCAATCCAAGCTAAAGC 1056 Query 223894 CCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAACAACTTCGATTT 223953 |||||| || || || |||| |||| || |||| | || ||||| | | ||| Sbjct 1055 CCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGATCGCGTTAAAAAGACACATTTT 996 Query 223954 CTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTATTGAATGTATATT 224013 |||| | || | ||||| ||||| ||||| ||||||||| | ||| ||||| Sbjct 995 TTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGCTATACATTTCCGTATGAATATT 936 Query 224014 TTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTTCTGTCAT 224073 |||||| || || ||||| |||||||| |||| ||||| ||||| ||||| | | Sbjct 935 TTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTTCTGCAATTTGAACTTCGGCTAA 876 Query 224074 AAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAAAAAATGCCAATAT 224133 ||||| ||| ||| |||||||| || | |||| ||||| || || ||||| Sbjct 875 AAATCGCTGGACTATATTTTCTAATACAATGCAATCAGCATTTGCAAAGAAAGCTAATAT 816 Query 224134 CATAGAAATAAAATATC-TTTCATCATTGGTTAATGATAACCAGTGCGATAAATCTTTTG 224192 || ||| || ||||||| | |||||| |||||| |||||| |||| Sbjct 815 -GTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGGTACCAGTCTTGTAAATCCTTTG 757 Query 224193 ATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACATTTCCCATA 224252 |||||||||||| | || ||||||| || | | |||||||||||||||| ||| | Sbjct 756 TTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGTGCTTTTTTATACATTGTCCAAA 697 Query 224253 TATCTTGGTCTTGTATCGGAAACATTACAAAGCG 224286 | | | |||||| ||||| | |||||||| Sbjct 696 ATTTATCATATTGTATTGGAAATAGAACAAAGCG 663 >seq559689 Length=1448 Score = 145 bits (160), Expect = 2e-29 Identities = 137/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 140525 TAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATC 140584 || ||||||||| || || |||||||| |||||||| |||||| | ||| | |||| Sbjct 84 TAAAACAAGATGTAGTGTTGACTCTTTCTGAATATTGTAATCACCAAGGGTTTGGCCATA 143 Query 140585 TTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644 | |||||| | ||||||||||| ||||||||||| || ||||||| ||||| || || Sbjct 144 TCTAAGTTGCTGACCAGCAAAGATAAGACGTTGCTGTTCTGGAGGAACACCTTCCTTGTC 203 Query 140645 CTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTA 140699 ||| || |||||||| || | | ||| | |||||||||||||| ||||| ||| Sbjct 204 CTGTATCTTAGCTTTGACGTCTTGAATGGTGTCAGATGGTTCAACCTCAAGAGTA 258 >seq396905 Length=1799 Score = 134 bits (148), Expect = 4e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 || ||| |||||||| | | | ||||||| || || | ||||| || || || || Sbjct 678 TTGCATTCCACCACGAAGAAACAAAGCAAGATGCAGTGTGGCTTCTTTCTGTATGTTGTA 619 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 ||||| || || | |||||| ||| || || |||||||||| ||||||||||| || Sbjct 618 ATCAGCTAGGATTTGGCCATCTCGAAGCTGCTTACCAGCAAAGAGAAGACGTTGCTGTTC 559 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 ||| |||| ||||| || ||||| || |||||||| ||| | ||||| | ||| ||| Sbjct 558 TGGATGAATACCTTCCTTGTCCTGTATCTTAGCTTTAACACTTTCAATAGCCTCAAGTGG 499 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCC 140710 |||||| ||||| | || ||| ||||| Sbjct 498 TTCAACCTCAAGAGGAATTGTTTTTCC 472 Score = 100 bits (110), Expect = 8e-16 Identities = 122/165 (74%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| ||| |||||||| | | | ||||| ||| | || ||||| || Sbjct 1236 ACAAATATTTG-CATTCCACCACGAAGGCGCAAAACAATATGGATTGTGCTTTCTTTCTG 1178 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 || || || ||||| | ||||| ||| |||||| || | ||||||||||| | ||| Sbjct 1177 TATGTTGTAGTCAGACAGGGTTCGGTCATTTTCAAGCTGATCACCAGCAAAGATAAAACG 1118 Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTT 140659 ||||| || |||||||| ||||| || ||||| || |||||||| Sbjct 1117 CTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGTATCTTAGCTTT 1073 >seq3530745 Length=203 Score = 113 bits (124), Expect = 1e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 183671 TAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTC 183730 |||||| |||||||||| |||||||||||||||||||| |||||||| | || || || Sbjct 188 TAATCTGCTATCAAAATCCTCACCACCTAAATGTGTATCCCCAGCAGTCGACTTTACCTC 129 Query 183731 AAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 ||| ||||| ||| ||| | || | || || ||||||||||||||||||| ||||| Sbjct 128 AAAAATTCCATCTGAAATGGTCAATACAGACACGTCAAATGTACCACCACCCAGGTCAAA 69 Score = 100 bits (110), Expect = 8e-16 Identities = 131/179 (73%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCA-AGaaaaaaaTAT 349770 || || || ||||| ||||||| || || ||||| | | | || ||| || ||| | Sbjct 3 CCAACAGCAGCAGCTCTTGCATACGGACTCGATAAGAAGC-TCACGGGAGAGAAGAATGT 61 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 | || ||||| | ||||||||||| ||||| || || || | || || ||| || Sbjct 62 CTTGATCTTTGACCTGGGTGGTGGTACATTTGACGTGTCTGTATTGACCATTTCAGATGG 121 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 ||||||||| || || | |||||||| ||||||||| | ||||| || |||||||||| Sbjct 122 AATTTTTGAGGTAAAGTCGACTGCTGGGGATACACATTTAGGTGGTGAGGATTTTGATA 180 >seq3148421 Length=155 Score = 111 bits (122), Expect = 5e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| ||||||||||| || || ||||| ||||| || ||||| || |||||| Sbjct 17 CCAGCAAAGATAAGACGTTGCTGTTCTGGTGGAATACCTTCCTTGTCCTGTATCTTAGCT 76 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | ||||| ||||| | |||||||| | ||| ||||| |||| ||| ||||| || Sbjct 77 GTGACATTTTCAATGGTGTCAGATGGGTTAACCTCAAGAGTAATTGTTTTTCCTGT 132 >seq3747720 Length=279 Score = 109 bits (120), Expect = 2e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 183569 TTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATC 183628 |||||||| ||| ||| || | |||||||| || | ||| || | || || || Sbjct 221 TTTAGCTCTTTCTGCTGCGGTGCGAAGTCGACGCAAAGCTCTCTTGTTGACAGTCATGTC 162 Query 183629 TTGTTTATGTTTTCTTTTAAATTCAG-TAATAAAATGTTGAAGTAATCTTGTATCAAAAT 183687 | || ||||||||| ||||| | | | | | ||||| | | || ||||||| | Sbjct 161 CTTCTTGAATTTTCTTTTGAATTCGGCTGAGAGATGGTTGACG-AGCCTGTTATCAAAGT 103 Query 183688 CTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAA 183747 |||| || || ||||| || || || || |||| ||| ||||| || || || ||||||| Sbjct 102 CTTCTCCGCCCAAATGGGTGTCTCCTGCGGTAGATTTCACTTCGAAGATACCATCTTCAA 43 Query 183748 TATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAA 183789 | | || | || ||||||||||||||||||||||| |||| Sbjct 42 TGGTCAACACCGACACATCAAATGTACCACCACCCAAGTCAA 1 Score = 84.2 bits (92), Expect = 6e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 349779 TTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTG 349838 |||| || ||||||||||| |||||||| || | | || ||||||| || || || | Sbjct 1 TTGACTTGGGTGGTGGTACATTTGATGTGTCGGTGTTGACCATTGAAGATGGTATCTTCG 60 Query 349839 AAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCG 349898 |||| ||| | || || || || || ||| | || |||||||| |||||||| | |||| Sbjct 61 AAGTGAAATCTACCGCAGGAGACACCCATTTGGGCGGAGAAGACTTTGATAACAGGCTCG 120 Query 349899 T 349899 | Sbjct 121 T 121 >seq809212 Length=835 Score = 109 bits (120), Expect = 2e-18 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 |||||||| || || |||||||| | || |||| ||| | ||||| ||||||||| Sbjct 129 ACAAGATGCAGTGTTGACTCTTTCCGTATGCCATAAGCAGCAATGGTTCGGCCATCTTCA 188 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 || || || |||||||||| | |||||||||||| ||||| ||||| | ||||| Sbjct 189 AGCTGCTTACCAGCAAAGACAATACGTTGCTGATCTACAGGAACACCTTCCATGTCCTGT 248 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAA 140688 | |||||||| ||| ||||| | || |||||||||| Sbjct 249 ACCTTAGCTTTGACACATTCAATAGTGTCTGATGGTTCAA 288 >seq564260 Length=889 Score = 105 bits (116), Expect = 2e-17 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 183638 TTTTCTTTTAAATTCAGTAATAAAATG-TTGAAGTAATCTTGTATCAAAATCTTCACCAC 183696 ||||||||| ||||| | | | ||| |||| | | ||| | ||||| ||||| || | Sbjct 128 TTTTCTTTTGAATTCGGCAGAGAGATGATTGACG-AGTCTGTTGTCAAAGTCTTCGCCGC 186 Query 183697 CTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAA 183756 | ||||| || || || ||||||| ||| || || || || || |||||||| |||| | Sbjct 187 CCAAATGGGTGTCTCCTGCAGTAGATTTTACCTCGAAGATGCCATCTTCAATGGTTAACA 246 Query 183757 TTGATACATCAAATGTACCACCACCCA 183783 ||| |||||||||||||||||||||| Sbjct 247 CTGACACATCAAATGTACCACCACCCA 273 >seq215353 Length=926 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | ||||||||||| || || ||||| || ||||| | || | || |||| Sbjct 446 CCGCCGTTGGAATCGATTTGGGGACAACTTACTCCTGTGTGGGAGTGTTCCAGAATGGAA 387 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || ||||| || || ||||||||||| ||| |||| || ||| || || ||||| | Sbjct 386 AAGTTGAAATTATCGCCAATGATCAAGGAAACCGAACCACACCAAGCTATGTGGCATTCA 327 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGC 349362 ||| || ||| | ||||||| ||| |||| || || |||| ||| Sbjct 326 ACGACACAGAGAGATTGATTGGCGATGCTGCCAAGAACCAAGTTGC 281 >seq3818713 Length=331 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140531 AAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAG 140590 |||||| || || ||||||||| |||| || ||| | ||| | ||||||||| Sbjct 75 AAGATGCAGCGTTGACTCTTTTGGAATGCGGTATTCATCAAGAGTTTCACTATCTTCAAG 134 Query 140591 TTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAAT 140650 |||| ||||||||||| |||||||||| | || |||| |||||| | ||||| || Sbjct 135 CAGTTTACCAGCAAAGATGAGACGTTGCTCGTTTGGGGGAAAGCCTTCTCTTTCCTGTAT 194 Query 140651 TTTAGCTTTTACATTATCAA 140670 |||||||| |||| |||| Sbjct 195 CTTAGCTTTGACATCTTCAA 214 >seq1104584 Length=100 Score = 91.5 bits (100), Expect = 4e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 140582 ATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 140641 ||||||||| ||||| |||||||| | ||||||||||| || ||||||| ||||| | Sbjct 1 ATCTTCAAGCTGTTTACCAGCAAACACAAGACGTTGCTGGTCTGGAGGAACACCTTCGAT 60 Query 140642 ATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| || |||||||| ||| | ||||| | |||||| Sbjct 61 GTCCTGTATCTTAGCTTTGACAATCTCAATGGTGTCAGAT 100 >seq650275 Length=2042 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140531 AAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAG 140590 |||||| | || ||| ||| | || ||||| || || | || || ||||||||||| Sbjct 1011 AAGATGGAACGTTGACCATTTCTCGATGTTATACTCTGAGAGAGTGCGGCCATCTTCAAG 1070 Query 140591 TTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAAT 140650 |||||||||||||||||| ||||| || || || || |||| || || || ||||| Sbjct 1071 TTGTTTTCCAGCAAAGATAAGACGCTGGTGCTCTGGTAGAATGCCCTCCCAGTCTTGAAT 1130 Query 140651 TTTAGCTTTTACATTATCAAT 140671 | ||||| ||||| || || Sbjct 1131 CTGGGCTTTCACATTCTCGAT 1151 >seq3830724 Length=343 Score = 84.2 bits (92), Expect = 6e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 223741 TTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCA 223800 ||| || ||||| || ||||| ||||| || |||| ||||||||||| ||||| ||| Sbjct 250 TTCGTTGGAAAACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGC 309 Query 223801 AAAAGCTCCTGaaaaaaaTATACCTTCTACA 223831 |||| || |||||||||| |||||||||| Sbjct 310 GAAAGAACCCGAAAAAAATACACCTTCTACA 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1438213391500446