Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq396905 123 3e-23 seq3502748 105 7e-18 seq3148421 104 3e-17 seq559689 104 3e-17 seq3113445 95.1 1e-14 seq3785240 93.3 5e-14 seq456579 87.8 2e-12 seq3695667 86.0 7e-12 >seq396905 Length=1799 Score = 123 bits (136), Expect = 3e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || || || ||| ||||||||||||| || ||| |||| || | | || ||||| Sbjct 472 GGAAAAACAATTCCTCTTGAGGTTGAACCACTTGAGGCTATTGAAAGTGTTAAAGCTAAG 531 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||||||||| || |||| |||||| ||||| ||||| | |||||||||||||| Sbjct 532 ATACAGGACAAGGAAGGTATTCATCCAGAACAGCAACGTCTTCTCTTTGCTGGTAAGCAG 591 Query 27553 C-TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCT 27611 | |||| |||| | | |||||| || || || | || || ||| |||| || ||||| Sbjct 592 CTTCGA-GATGGCCAAATCCTAGCTGATTACAACATACAGAAAGAAGCCACACTGCATCT 650 Query 27612 AGTCTTGCGTCTTCGCGGTGGA 27633 | ||| |||||| |||||| Sbjct 651 TGCTTTGTTTCTTCGTGGTGGA 672 Score = 116 bits (128), Expect = 4e-21 Identities = 120/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536 ||||| || ||||| || ||||||||||| || ||||||||||||||||||||| | || Sbjct 1066 AAATTGCAAAGCTAAGATACAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGTTTTAT 1125 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 ||||||||| | || || || |||| || ||||| | ||||| || | || || || Sbjct 1126 CTTTGCTGGTGATCAGCTTGAAAATGACCGAACCCTGTCTGACTACAACATACAGAAAGA 1185 Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||| | ||| | || ||||| ||||| |||||| Sbjct 1186 AAGCACAATCCATATTGTTTTGCGCCTTCGTGGTGGA 1222 >seq3502748 Length=197 Score = 105 bits (116), Expect = 7e-18 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || |||||||| |||||||| || |||| |||||| ||| | ||||| || |||| ||| Sbjct 3 ATCTTTGCTGGCAAGCAACTTGAAGATGGTCGTACACTATCGGACTACAACATCCAGAAG 62 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||||||||||| ||||| ||| ||||||| ||||| ||||| Sbjct 63 GAATCCACTCTCCATCTTGTCCTGCGTCTGCGCGGCGGACA 103 >seq3148421 Length=155 Score = 104 bits (114), Expect = 3e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 |||| || || || ||||||||||||||| | || ||| | ||||| |||| | | | Sbjct 134 TTACAGGAAAAACAATTACTCTTGAGGTTAACCCATCTGACACCATTGAAAATGTCACAG 75 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 |||| || ||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct 74 CTAAGATACAGGACAAGGAAGGTATTCCACCAGAACAGCAACGTCTTATCTTTGCTGGTG 15 Query 27548 AGCAACT 27554 ||||| Sbjct 14 CCCAACT 8 >seq559689 Length=1448 Score = 104 bits (114), Expect = 3e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 27444 TACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAA 27503 ||||||||||||||| || ||| | |||| | | | || ||||| || |||||||| Sbjct 258 TACTCTTGAGGTTGAACCATCTGACACCATTCAAGACGTCAAAGCTAAGATACAGGACAA 199 Query 27504 GGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGA 27563 ||| || |||||||||| ||||| ||||| || ||||||||| ||||||| ||| Sbjct 198 GGAAGGTGTTCCTCCAGAACAGCAACGTCTTATCTTTGCTGGTCAGCAACTTAGATATGG 139 Query 27564 TCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 | ||||| | || || ||| | || || || || || || ||||| || || || Sbjct 138 CCAAACCCTTGGTGATTACAATATTCAGAAAGAGTCAACACTACATCTTGTTTTACG 82 >seq3113445 Length=152 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 27447 TCTT-GAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGG 27505 |||| |||||||| || | || | | | | ||| ||||||| | ||||| |||| || Sbjct 152 TCTTAGAGGTTGAACCAAGCGAAACCGTCGACAATGTGAAGGCCATGATTCAAGACAGGG 93 Query 27506 AGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATC 27565 |||| ||||| ||||||||||||||||| | |||||||| ||||| | ||||||| | Sbjct 92 AGGGTATTCCACCAGACCAGCAGCGTCTTACCTTTGCTGGCAAGCAGTTGGAGGATGGCC 33 Query 27566 GTACCCTAGCAGACTATAA 27584 || || ||||||| || Sbjct 32 ACACTCTCTCAGACTACAA 14 >seq3785240 Length=303 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 ||||| || | |||||||| |||| | || | | ||||| |||| |||| ||| || Sbjct 151 GGCAAAACAAGTACTCTTGTGGTTAAACCATCACACACCATTGAAAATGTGAAAGCTCAA 92 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAA 27548 || |||||||| || || |||||||||||||||||| |||| |||| | ||| ||| Sbjct 91 ATACAGGACAAAGAAGGCATTCCTCCAGACCAGCAGTGTCTTATTTCTACTGATAA 36 >seq456579 Length=1737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/231 (69%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 64628 TGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGT 64687 || ||| || || || ||| | ||||| || | || || || || |||||| | | | Sbjct 840 TGCTCAAAGCGATTGAAACTATTCCCGCGGTGAAAAAGAAAGCCGACTGGGCCCTGAGAT 899 Query 64688 GGATGAATC---GTGGGTCGTCGTTTGGTCA-GCGTCTCGCAGCTTTTGCCTGTGTGGAA 64743 |||| ||| || | | || ||| | || | | |||| ||||| ||| || ||| Sbjct 900 GGATCAATGATAGTCGAGCCTC-TTTCGCCACGAGACTCGTCGCTTTCGCCATCGTCGAA 958 Query 64744 GGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATG 64803 |||||||||||||| || || ||| | || |||||| | || || |||| |||||| Sbjct 959 GGAATTTTCTTTTCCGGATCGTTCGCCGCGATATTCTGGTTGAAGAAAAGGGGTCTGATG 1018 Query 64804 CCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCAC 64854 || |||||| | || || ||||| || ||| || ||||||| | | ||| Sbjct 1019 CCCGGTCTGACCTTCTCCAACGAACTCATCAGCCGCGACGAGGCGTTACAC 1069 >seq3695667 Length=253 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || ||||||||| | || || ||||| || ||||| || ||||||| || Sbjct 4 GGCATCCCCCCTGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGC 63 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || | ||||| || |||| ||||| ||||| || ||||| || || | |||||| Sbjct 64 ACACTGTCCGACTACAACATCCAGAAGGAGTCCACGCTCCATCTGGTGCTGAGGCTTCGC 123 Query 27628 GGTGG 27632 ||||| Sbjct 124 GGTGG 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542020993815840