Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq577692 419 3e-112 seq3816217 266 4e-66 seq3751544 163 3e-35 seq982030 127 2e-24 seq3172301 105 8e-18 seq3509123 100 3e-16 >seq577692 Length=2825 Score = 419 bits (464), Expect = 3e-112 Identities = 525/718 (73%), Gaps = 4/718 (1%) Strand=Plus/Plus Query 176095 CTCCAAGGTTGGGAGCAGTTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTT 176154 ||| | | |||||| ||||||||| ||||| || ||| || ||| | |||| || Sbjct 156 CTCAATGTTTGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTA 215 Query 176155 GGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCA--TGTTTTATCG 176212 |||||||||||| | | ||||| || |||| ||||| || || |||||| | Sbjct 216 GGTTGGTTTGGTATTGTGATGATCCCTACCTTGCTAACTGC--CACCATCTGTTTTGTGT 273 Query 176213 TTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGAT 176272 | || ||| | || ||||| ||||| ||||| ||||| || |||||||| || | || | Sbjct 274 TAGCTTTTGTAGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTT 333 Query 176273 CTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCG 176332 |||| | || || || ||||||||| | | || || || || || || || || || | Sbjct 334 CTCTGTTGTACGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTG 393 Query 176333 GACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAG 176392 | | ||||| || || ||||||||||| |||| |||| |||||||| || || || | Sbjct 394 GGTTGCACTTTTATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCG 453 Query 176393 GACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCC 176452 | || ||||| | |||| ||||||||||| ||||| || | || ||||| || Sbjct 454 GCCCCTACCAGTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTG 513 Query 176453 AATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCAC 176512 | |||||||| ||| | |||| |||||||||||||| |||||| || || | Sbjct 514 AGTGGGAACTGTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTC 573 Query 176513 CAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTG 176572 | ||| |||| |||| ||| || | | || ||| | |||||||||| ||||| |||| Sbjct 574 CTGTAGCTGCTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTG 633 Query 176573 ATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGC 176632 ||||| | || || || ||||| || ||||| ||||||||||| || | |||||||||| Sbjct 634 ATGGTTTACCGCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGC 693 Query 176633 ACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTC 176692 | || || |||||||||| ||||||||||| |||||||| ||||| |||||||| ||| Sbjct 694 ATAATGTTTTAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTC 753 Query 176693 TTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAA 176752 |||||||||| |||||||| ||| || || ||||| | || | || || || |||| Sbjct 754 TTTTCTCAGCTATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAA 813 Query 176753 ACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGT 176810 ||| |||||| ||||| || |||||||||||||| || || |||||||| Sbjct 814 TTGAAAGCCAAAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 266 bits (294), Expect = 4e-66 Identities = 259/332 (78%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 176620 TTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTG 176679 ||||||||||| |||||||| || |||||||| ||||||||| | ||||| || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 176680 TTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGA 176739 || ||||| || | ||||| || |||||||| | | || |||||||| | || | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 176740 GAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACA 176799 || || ||||||| |||||| ||||||||||||||||||||||| ||||||||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 176800 TACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 176859 ||||||||||| || || ||||||||||| ||||| || |||||||| |||||||||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 176860 AATAACTCAAGAAGT---CTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGG 176916 || ||| || || || ||||||||| | | || | || || | |||||||| Sbjct 241 AACAAC---AGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGG 297 Query 176917 TTTACTGCAATGGGTGTTTGCACAATGGCATT 176948 || || || | ||||| | ||| ||||| || Sbjct 298 TTCACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 163 bits (180), Expect = 3e-35 Identities = 194/263 (74%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 176134 ACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACT 176193 || |||||| | |||| || || ||||| ||||| || ||||| || || || ||| Sbjct 19 ACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCTACCCTACTAACT 78 Query 176194 GCTGCAGCATGTTTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATT 176253 ||| | || | ||| | || ||||| || || || || || || || |||||||| Sbjct 79 GCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGACATTGACGGTATC 138 Query 176254 CGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTC 176313 |||||||| ||||| || ||||| | || || |||||||||||||| || || || || Sbjct 139 CGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCTGGTGCGGTTGTT 198 Query 176314 CCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGAC 176373 || ||| || || ||||| || ||||||||||| || ||||||||||| | | || Sbjct 199 CCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCAGCCAGCTTGGAT 258 Query 176374 GAATGGCTCTACAATGGAGGACC 176396 |||||||||||||| || || || Sbjct 259 GAATGGCTCTACAACGGTGGCCC 281 >seq982030 Length=2848 Score = 127 bits (140), Expect = 2e-24 Identities = 308/469 (66%), Gaps = 18/469 (4%) Strand=Plus/Minus Query 19239 GCAGCAAAATATATGTTGCAAGGTCTTTCTGTTACTCTATCAC-ATATGGGTAGAAGACC 19297 || || |||||||| || ||||| ||||| || || | || | ||| | |||| Sbjct 1531 GCCGCTAAATATATCGGTCAGGGTCTATCTGTCAC-CTTTGACCACATGAAGCGGCGACC 1473 Query 19298 TGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCGTAT 19357 | || || || || || || || ||||| || || || || || | ||| ||||| || Sbjct 1472 CATTACTGTTCAATACCCCTATGAAAAACTGATTCCTTCCGAAAGGTTCCGGGGTCGCAT 1413 Query 19358 ACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTATCAA 19417 |||| ||||||||| ||||| ||| |||| ||||| || || || |||||||| || || Sbjct 1412 TCACTTTGAGTTTGATAAGTGCATCTCCTGCGAGGTCTGCGTCAGGGTATGCCCCATTAA 1353 Query 19418 TCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAGAAGAAAGAACTTAGAAATTA 19477 || || || || || |||| | ||| | || ||||| |||||| | Sbjct 1352 CCTCCCCGTCGTAGACTGGGAATTTAACCGGGAAACTAAGAA-AAAGAA----------A 1304 Query 19478 TTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAACAAA 19537 || | ||||||||||| || || || ||||| || || || Sbjct 1303 CTC-----ANNNNNNNNNNNNNNNCTTCTGCGGTAATTGTGTCGAATATTGTCCGACTAA 1249 Query 19538 CTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGACAGACATCAACTTAACTT 19597 ||||| || ||||| |||||||| ||| |||| | | || | ||| | | |||| Sbjct 1248 TTGTCTGTCAATGACGGAAGAATACGAACTGGCGGCTTACGATCGCCATGAGTTGAACTA 1189 Query 19598 TGATAACGTCGCTCTTGGACGATTGCCCACTAATGTTACAACTGATCCCTCAGTTAGACC 19657 ||||| || || || ||||| || ||| || || || |||||| || | || Sbjct 1188 TGATAGTGTGGCACTGGGACGGTTACCCTACAAGGTGACTGATGATCCGATGGTGACTCC 1129 Query 19658 GTTGCGTGAGCTTACTTATTTACCCAAAGGTGAGATGGATCCTCACAAT 19706 |||| || ||| | ||||||||||| || | ||||| || ||| || Sbjct 1128 CCTGCGGGAACTTGCCTATTTACCCAAGGGAGTTATGGACCCCCACGAT 1080 >seq3172301 Length=157 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 176476 GGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTT 176535 || ||||||||||||||||| || || ||| ||||| || | || || | ||||| Sbjct 143 GGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCTGCTAGTGCAGTA 84 Query 176536 TTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCA 176595 ||| | |||| || |||| ||||| |||||||| || ||||||||||| || || || Sbjct 83 TTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCTCTGGGTATCTCC 24 Query 176596 GGTACATTCAACTTTATGTTTGT 176618 || || |||||||| ||||| || Sbjct 23 GGAACTTTCAACTTCATGTTGGT 1 >seq3509123 Length=199 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 176956 AACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGG 177015 |||||||||||||||||||| || || | ||| | ||| || || || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 177016 GGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCAC 177075 | ||| || | ||||| || ||||| ||||||||||| ||||||||||| || |||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 177076 AACTTCCCACTTGACCTTGCTGCTGCAGAGACAACTCAGGTTGCTCTTACTGCACCATCA 177135 |||||||| | || | ||| |||| ||| | | || ||| | |||||| | Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCTCAA 180 Query 177136 ATCGGTTAATGGTTACCT 177153 ||||| |||| | || || Sbjct 181 ATCGGCTAATTGATAGCT 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573558950442240