Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq3964776 475 8e-130 >seq3964776 Length=1148 Score = 475 bits (526), Expect = 8e-130 Identities = 805/1149 (70%), Gaps = 19/1149 (2%) Strand=Plus/Minus Query 24443 GTGTCTGTCAGATTA-ATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAA 24501 ||||||| ||| ||| || |||||| |||||||| || |||| ||| ||| ||||||| Sbjct 1147 GTGTCTGCCAGTTTAGATCTGAGCT-AAATTCTTCTCAGCCCAGATCGTTTTACCATCAA 1089 Query 24502 GTAAGGTTGCCATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCGATGGTGAT 24561 |||| |||||||| || |||||||| |||||||| || || ||||| ||||| | | | Sbjct 1088 GTAAAGTTGCCATTGGCGTTCTGCCGCAGCACATCTTGCCCTGATGAGTTCGCTCATTGT 1029 Query 24562 TATAATACATTAACCACTCATCTAAATCCGCTTGTAATGTCGTTAA-ATCCGTATAAATT 24620 | ||||| | | ||| || || | ||| ||||| ||||||| ||| | ||| | | Sbjct 1028 TGTAATATTTAATCCATTCGTCCAGATCTTTTTGTAGC-TCGTTAATATCGGCATACAGT 970 Query 24621 TTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAG 24680 ||||| | || | | || || || ||||||| || || || ||||| || |||||| Sbjct 969 TTCTTGCGGAAGGTGATCTGATAGAACTCTTGTAGAATGGTCTTGTGGAAGCGCTCGCAG 910 Query 24681 ATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTTATTGCT 24740 || || || || |||||||| || | || || || | || ||||| ||||| || || Sbjct 909 ATCCCATTGGTTTGCGGATGCATTGCTTTCGTCTTCGTATGATCAATGTCATTGATCGCC 850 Query 24741 AAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTT 24800 ||||| |||| |||||| || | || || |||||||| || |||| || || || Sbjct 849 AAATACAGCTGATAATCATGCTGCTCAACACGACCACAATACTCCGTTCCACGATCCGTC 790 Query 24801 AATATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGC 24860 ||||| || ||||||||||| | || || ||| | ||||| ||| || || || Sbjct 789 AATATCCGCAACATCGGTAATTCATGTTGCTCGAAGAACGGTAATACTCGGTCGTTGAGG 730 Query 24861 ATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACTG 24920 || || || | || | |||||| | || || | ||| || || ||||| ||| Sbjct 729 GCGTCGGCTGCCGTTATTGGTGTCTTCGTCGTGTACAATTTACAGAAGGCGACTTTGCTG 670 Query 24921 TAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAG 24980 || || || | ||| || || || ||||| ||||| || || ||||| |||||||| ||| Sbjct 669 TAGGTGTCGACAAATGTCTGCTGGTAAATCCGACCAACACCCTTGAGATTGCCCACGTAG 610 Query 24981 AAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCACAGGCAATC 25040 || || ||||| ||||||||||| || || || ||||||||||| || || || Sbjct 609 AAGGTGTCTTGAGAGCCAAGATAACCGGGATGATGGGTTTCAATTTCCCCGCATGCTTCG 550 Query 25041 TCATCTTCTTTCTTACGCTCTAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGT 25100 ||||| | |||||| || | |||| ||||| | ||||| || || || || | Sbjct 549 TCATCATGTTTCTTCTTTTCAAGGGCTGCAACCTGGGCATCACTCAGAATTATCCCGTCA 490 Query 25101 TCTGCAACCAGTTTTTCCAGGGCGATTAA---TCTTTGCTTAAAATTGGCAAGATGATGA 25157 || || | | |||||| || |||| |||| ||||| || ||||| || Sbjct 489 GTAGCGACTCGCTCTTCCAGTGC-TTTAAGCCGCTTT--TTAAAGTTCTCAAGACCATTG 433 Query 25158 CGTAACCAAATCGAACGTACACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCG 25217 |||||||| || || || ||||| | | |||||||||| |||| | | || |||||| Sbjct 432 CGTAACCAGATTGACCGAACACCACTGCCAGAAACAAAGACGCCTATTCTGCGCAGTTCG 373 Query 25218 TTACTCACTCTTACCTGTCCAAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGC 25277 ||||| ||| ||| ||| || || | |||| ||| | | | || ||||| Sbjct 372 TTACTAGTTCTGTGCTGACCATGGGCTGGCTGCTCAATGGCATAACTAATGACCGCTTGT 313 Query 25278 TCTATTGCCTCATCAACACGATTTTTTAAGTT--GGGAAC-GCGTCTATTTTGATTCAGC 25334 ||||| | ||||| || |||||||| ||| ||| | ||| || || | | ||| Sbjct 312 TCTATCGTTTCATCGACTCGATTTTTGGTGTTAGGGGTTCTGCGGCTTTTGTTAATCA-- 255 Query 25335 AATGCTTCAACACCACCTTGCTCAACCGCTTGTTGATAACGATAGAATGTATCTCGGCTC 25394 ||| | || | || || | |||||| | |||| |||||||| ||||| || Sbjct 254 AATTC-TCGATCCCGCCATCATCAACCAGCTCACGATAGCGATAGAACGTATCCCGCGAT 196 Query 25395 ATTCCCATTACTTTGCAGGCTTGAGAAATATTACCCAGTTCTTCTGCTAAATTTAATAAA 25454 | ||||| || ||||| |||| ||||| ||||| || ||||| |||||||||| | | Sbjct 195 ACGCCCATGACCTTGCATGCTTTAGAAACGTTACCGAGCTCTTCCGCTAAATTTAGCAGA 136 Query 25455 CCGGTCTTGTGTTTAATGAGAGGGTTGTTAGAATAAAACATGAGAGTTTCCTTTTTGTTT 25514 || | ||||||||||||| || ||| ||| || | |||||||||| ||||||||||| Sbjct 135 CCTGCTTTGTGTTTAATGATGGGATTGCTAGTATGGAGCATGAGAGTTACCTTTTTGTTT 76 Query 25515 AGA-TTGATTTTTGACACTCATATTCTAAACGGGAAACTCTCACTTTTTAGAG-TGAATT 25572 || || | || ||||| | | || ||||||| ||||||| ||| || || || | Sbjct 75 TGATTTAAGATTCGACAC-CTTTATCAAAACGGGTAACTCTCTCTTCTTCAAGAAGATAT 17 Query 25573 GTCAGATCA 25581 ||||||||| Sbjct 16 GTCAGATCA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108935907976184