Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq760737 309 2e-79 seq456579 205 8e-48 seq3830724 127 2e-24 seq3953357 102 7e-17 seq817554 96.9 3e-15 seq942746 95.1 1e-14 seq550287 87.8 1e-12 >seq760737 Length=2966 Score = 309 bits (342), Expect = 2e-79 Identities = 650/958 (68%), Gaps = 26/958 (3%) Strand=Plus/Minus Query 4190 TTCGTACGTCAGTTAAAAGTCCACGTCTAGAGTAAACGTCATATCGGACTTT----GAAC 4245 ||| || |||| |||||| |||| ||| || ||||| || | | ||| |||| Sbjct 1613 TTCTTAAGTCATTTAAAAATCCATGTCAGTTGTGAACGTG-TACTGCATTTTTTGAGAAC 1555 Query 4246 A---AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTT 4302 | ||| || |||||||||| ||| |||| ||||| || || |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 4303 CTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGT-TTTTCACAC 4361 | | |||||||| |||||||| |||||||| || | ||| | ||| |||| ||| Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGC-GAAATAACTTTTTACAA 1436 Query 4362 TTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAG 4421 | ||||||| | ||||| || ||||||||||||||||| |||| || || Sbjct 1435 CCCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTA 1376 Query 4422 TTAATTCCAATTAATCTCA-CAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTAC 4480 || |||||||| | | | | || | ||| | ||||| |||| ||| ||| || Sbjct 1375 TTCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAA-TCTTTTTCGATATCGAC 1317 Query 4481 GGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA---TCC 4537 || || | || | | || | || | ||||| | | |||| | || Sbjct 1316 TGCGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCT 1257 Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 ||||| | || | |||||| ||||| || ||||||||||| ||| | |||||| || Sbjct 1256 AAACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGA 1197 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 ||| || | ||| || | || ||||||||||| ||||||||||| || || ||||| || Sbjct 1196 AAAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCC 1137 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC 4717 | |||| || ||||||||||| ||||| || | ||| | | || ||| Sbjct 1136 ACAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAATGAG----- 1082 Query 4718 TTTGTC---TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 || || | |||||| ||| ||||| | ||| || || |||||||| || | || Sbjct 1081 -TTATCAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGT 1023 Query 4775 GTATATAGCGTTAAATAATTTAC-TTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTA 4833 | || |||||||| || || |||||||| | ||||| |||||||| || |||| Sbjct 1022 TTCGATCGCGTTAAA-AAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTA 964 Query 4834 GTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATC 4893 | |||||||||||| | ||| |||||||| || ||||||||||| || ||||||||| Sbjct 963 ACAAGCTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATT 904 Query 4894 TAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATAC 4953 | ||||| | |||||||||| |||||| | |||| ||||| ||| || | Sbjct 903 TTATTTCTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGC 844 Query 4954 CGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA 5013 ||| |||||| || || || | | || || || ||| || | | | Sbjct 843 AATCAGCATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTA 784 Query 5014 GTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073 || | ||||| | ||||| || |||||||||||||| | ||| |||||||| || | Sbjct 783 ATTGGTACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAG 724 Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 | | |||||||| ||||| | ||||| | | ||| || || |||| || ||||| Sbjct 723 CCTGTGCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 205 bits (226), Expect = 8e-48 Identities = 405/597 (68%), Gaps = 2/597 (0%) Strand=Plus/Minus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 ||||||||||| || |||||||| || || | ||||| | ||| || |||||||| || Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || || | |||||||| | ||| || || || | ||| ||||| ||||| || || || Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGC 4717 |||||||| || ||||| ||| ||| || || || | || | |||| || ||| | Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCG- 914 Query 4718 TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777 | || || |||||| | | ||||||| ||||| || || || ||||| || | Sbjct 913 ACTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTC 854 Query 4778 TATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAG 4837 || || || | || | | |||||| || || || || || || ||||| || || Sbjct 853 AATCGCTTTGAGCAAATATCGTTTTTCGCGTGAATCCTGGATGTAGGTATCTATGAGAAG 794 Query 4838 GCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGC 4897 || |||||||| || || || ||||| || |||||||| ||||||||| | | || Sbjct 793 GCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCGC 734 Query 4898 TTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 ||||| | || ||||| ||||||| | | | | |||||| || || ||||| Sbjct 733 TTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGTC 674 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT 5017 || | || ||||| || | | || || || || || | ||| | || || | Sbjct 673 GCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGACT 614 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 || ||| ||||| |||||| | | |||||| || | |||||||| || || || Sbjct 613 TTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCTC 554 Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 |||| |||||||| ||| | ||| || || ||||| | ||||| ||||| Sbjct 553 CGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 >seq3830724 Length=343 Score = 127 bits (140), Expect = 2e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 |||| ||||| ||||||||||| ||||| |||||||| | || || |||||||| ||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 ||||| ||||| ||||| || |||| ||||| | ||| ||||| ||||| || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 4659 GAAAAGAATATGCCTTCTAC 4678 ||||| |||| |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq3953357 Length=757 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||| || || |||| |||||||| ||| ||||||||||| | ||| || | Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || || | | ||||||||||| | ||| || || || ||||| || ||||| ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 4667 TATGCCTTCTACGGCGGCAAACGC 4690 || ||||| ||||||||||| || Sbjct 226 GATCCCTTCCACGGCGGCAAATGC 249 >seq817554 Length=629 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 4944 TTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG 5003 || || ||||||||||| || ||||| || ||||| ||||| || ||||||| | ||| Sbjct 267 TTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCTCG 326 Query 5004 TCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTC 5063 | || || || | ||||||| || ||||| | || |||||| ||||| || ||| Sbjct 327 TTGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACCGTC 386 Query 5064 CAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104 || || || || || || || |||||||| ||| ||||| Sbjct 387 CAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATC 427 >seq942746 Length=519 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||||||||| || ||||| || || || || || || ||||| | ||| ||||| || Sbjct 371 TCGTCTCTGCTGATGAGTTCATTGGAGAAAGTCAAACCAGGCATAAGACCCCTCTTCTTT 312 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || || ||||| ||||| || ||||| || || ||||| || ||||| || Sbjct 311 AGCCAGAAGATGGCAGCAAAAGACCCTGAGAAGAAGATACCCTCTACAGCAGCAAAAGCA 252 Query 4692 AC 4693 || Sbjct 251 AC 250 >seq550287 Length=542 Score = 87.8 bits (96), Expect = 1e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 || ||| ||||| ||||||||||| || ||||| || || || |||||||| ||||| || Sbjct 314 TTGTTGATATTCCGATACTCGCTTCTCAAAGAAGTTGGTCTTCCCTTCTAATGAAATGTT 373 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTA 4348 ||||| |||||||| ||||| || | ||||| Sbjct 374 CTCCATGAAATCAAATGGATTGGTCGATTTGTA 406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406396013627906