Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq760737 381 8e-101 seq718041 120 4e-22 seq817554 118 1e-21 seq3830724 105 9e-18 seq456579 87.8 2e-12 >seq760737 Length=2966 Score = 381 bits (422), Expect = 8e-101 Identities = 630/898 (70%), Gaps = 21/898 (2%) Strand=Plus/Minus Query 46325 ACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTT 46384 ||||||| || ||||||||| || || || | ||| || ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 46385 CCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATC 46444 | | ||| ||||| |||||||| |||||||| || || | | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 46445 CTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAAT 46504 | |||||| || || | ||||| || |||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 46505 TCATTCCTATGAGTTTGACCGGTAGAGCCT-CCGT---AAGAAACTCTTGTTCAATAGTG 46560 ||||||| || | ||| ||| || | |||| || ||| |||| ||| ||| | Sbjct 1374 TCATTCCAATCATTTTATTCGG----GCATGCCGTTTCAAAAAAATCTTTTTCGATATCG 1319 Query 46561 ACAGCATC-----CGATATTATCGATGTTACTGTTTCCT-CACTTGGTGGATGCATCAAA 46614 || || || | || || | ||| | | ||| | | || || | | || Sbjct 1318 ACTGCGTCACCAACAATTTTGTAAATGATG--GATTCATTCGGTTTTTGTTTTAAGCAC- 1262 Query 46615 TGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCG 46674 | | |||||| | || | |||||| ||||| | |||||| |||||| |||||||||| Sbjct 1261 TCTCTAAACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCG 1202 Query 46675 TTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAA 46734 || ||||| ||||| || || | | || | |||||| ||||||||||| || ||||| Sbjct 1201 TTTGAAAAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAAT 1142 Query 46735 GATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTG 46794 |||||| |||| || |||||||||||| || || |||| | |||||| | | | Sbjct 1141 GATCCACAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAATGAG 1082 Query 46795 GCATCATTATG-AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGT 46853 |||| ||| |||||| | ||||||||||||||| || || || ||||| | || Sbjct 1081 TTATCAG-ATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGT 1023 Query 46854 TTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAA 46913 ||| || || ||||| ||| | |||||||||| ||||| | ||| || || ||||| Sbjct 1022 TTCGATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAA 963 Query 46914 AAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCT 46973 | ||||||||||| | |||||| ||||| || || |||||||| || ||||| ||| | Sbjct 962 CAAGCTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTT 903 Query 46974 TGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTC 47032 | ||| | ||| || || || | ||||||| | ||| | ||| || || || | Sbjct 902 TATTTCTGCAATTTGAACTTCGGCTAAAAATCGCT-GGACTATATTTTCTAATACAATGC 844 Query 47033 CATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA 47092 |||| | ||||| || || |||| | || || || |||||||| ||||| | Sbjct 843 AATCAGCATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTA 784 Query 47093 GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACG 47152 || | |||||| | | ||| |||| || ||| ||||| | | ||||||| ||||| | Sbjct 783 ATTGGTACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAG 724 Query 47153 CCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||| ||||||||||||||| |||| | | | |||||| || ||||| | |||||| Sbjct 723 CCTGTGCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq718041 Length=1499 Score = 120 bits (132), Expect = 4e-22 Identities = 153/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828 ||||| || ||||| || || || ||||||||||| || | ||| || ||||||||||| Sbjct 392 TATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATTG 451 Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCT 76888 || |||| |||||| |||||| |||| | ||| || | ||||||| || ||| Sbjct 452 GTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTGAGGCCTACACCCCCT 511 Query 76889 GCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATC- 76947 || | || ||||| || || || | |||| |||||| ||||| || |||||||| || Sbjct 512 GCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTGTCT 571 Query 76948 -ATCCATCATGTTAAGAAGAAAACAGCTA 76975 || | |||| | || || ||||| ||| Sbjct 572 GATGC--CATGGTGAGCAGGAAACAACTA 598 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| ||||||||||||||||| || || ||||| || ||||| || ||||| || | || Sbjct 1332 AGTGCCTGCATTAAACAATGTGGGTGAGGCATGTGTAAACCACTTCTCAGAGAGCAAGTT 1391 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 || || |||||| | |||| || || || ||| || || || || || | ||||| Sbjct 1392 ATAGGTCTCAATAGCACCTTCAATGTCATTTTCATGGATGCCAACTGCTACCCTCATCAG 1451 Query 77113 CATATGCTGAGGTCGTTC 77130 ||| || || |||||||| Sbjct 1452 CATGTGTTGGGGTCGTTC 1469 >seq817554 Length=629 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 47021 CATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTT 47080 |||| || || || |||||||||||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 47081 CATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 47140 | | | | |||| || | ||||| || || ||||| |||| ||| || ||||| | | Sbjct 325 CGTTGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACCG 384 Query 47141 TCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAA 47200 |||||||||| |||||||| || || ||||| |||| ||||| | ||||||| || | Sbjct 385 TCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGGA 444 Query 47201 AAATAACAAA 47210 | | ||||| Sbjct 445 AGACGACAAA 454 >seq3830724 Length=343 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 |||| ||||| ||||||||||| || | ||||| || | ||| || | |||||| ||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || | || ||||| | ||| || ||||| | ||| ||||| || |||||||| || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 46741 GAAAAGAATATGCCTTCTACA 46761 ||||| |||| ||||||||| Sbjct 320 GAAAAAAATACACCTTCTACA 340 >seq456579 Length=1737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 46315 TCTTCTTGTGAC---ATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAA 46371 |||||| | ||| ||||| ||| | ||||||||||| ||||| | ||| ||||| ||| Sbjct 1464 TCTTCTGGCGACGTCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAA 1405 Query 46372 TTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGG 46415 || | || ||||| | |||||||| |||||||||||||| || Sbjct 1404 TTGCTCTTCCCTTCTAGGGATATATTCTCCATAAAATCAAAAGG 1361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 677570340666240