Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq982775 118 3e-22 >seq982775 Length=28252 Score = 118 bits (130), Expect = 3e-22 Identities = 360/553 (65%), Gaps = 4/553 (1%) Strand=Plus/Minus Query 676 GAGTGGGCCGACAAGCATTTCTACATGTCGGCCGAGTCCTCTTACAACGAGGGCCGCTGG 735 |||||||| ||| || |||| || | || || || || || |||| || || ||| Sbjct 2177 GAGTGGGCTGACGAGAATTTTTATCTTTCTAGTGAATCTTCATATCACGAAGGTCGTTGG 2118 Query 736 AAGACTGCGCCATTCCAGGTCGCGATCCTGAACGCGATGGGCAACGACCTGATTCGAGTG 795 || || || ||||| || |||||| | ||||| |||||| || || ||||| Sbjct 2117 AAAACGCTGCACTTCCAAGTGGCGATCTTAAACGCAATGGGCTCGGATGCAATCCGAGTT 2058 Query 796 GTCAACTTCGTGAAGTCGGCCCGGATCGGTTACACGAAGCTGTTGCTGGCCAACATCGGC 855 || ||| | || |||||||| || | |||||||| ||| || | || || || | Sbjct 2057 GTGAACGTGGTCAAGTCGGCTCGACTTGGTTACACCAAGATGCTCCTCGCTGCTATTGCG 1998 Query 856 TACAAGATCCAGCACAAGCGCCGCAACGTGATGATGTGGAGTCCGACCGACCCGGACGCC 915 ||| | | |||||||||| || ||||| || || |||||||| | ||||| Sbjct 1997 TACTACGTAGAGCACAAGCGTCGGAACGTACTGTCGTTCTCGCCGACCGATACCGACGCT 1938 Query 916 GAGGACATCAGCAAGAGCCACGTCAATGGCCTGATCCGCGACGTGCCGGTCATGCTGGAA 975 ||| | | || | ||||| || || || || || ||| || ||| Sbjct 1937 GAGAAGTTTTCAAAAACTCACGTTGATACAGCAATTCGTGATGTTCCGACGCTGAAGGAG 1878 Query 976 CTGGCGCCCTGGTTCGGTCGGAAGCACAGCGACAACACCTTGGACAACAAGGTGTTCGCG 1035 || || || |||| ||| ||||||| | || ||||| || || | ||| |||| | Sbjct 1877 CTTGCCCCTTGGTGCGGAATGAAGCACCGAGATAACACGTTAGATCAGAAGCGGTTCTCT 1818 Query 1036 AACCGGC--GCAACCTCTGGATACGCGGCGGCAAGGCCTCTCGGAACTACCGGGAGAAGT 1093 ||| ||| |||| | | ||||||||||| ||||| || |||||||||| || | || Sbjct 1817 AAC-GGCAAGCAAT-TATTCATACGCGGCGGTAAGGCGGCTAGGAACTACCGTGAAACGT 1760 Query 1094 CGCCCGACGAGGTAATCTACGACGAATTGTCGAAATTCGACGCCGACGTCGAGGGCGAAG 1153 | | || | || | || ||||| | | |||||| || | || |||| Sbjct 1759 CCGCTGATGTCGTCGTTTATGACGAGCTAGCCGCATTCGATAAGGATATTGAAAAAGAAG 1700 Query 1154 GCTCGCCGACATTCCTGGGTGACAAGCGCCTGGACGGTGCGGTCTACCCGAAGTCTATCC 1213 | |||||||| || ||||| ||||| || || ||| || ||| ||||| || | Sbjct 1699 GATCGCCGACCACTCTCGGTGATAAGCGTCTTGAAGGTTCGACGTACGGTAAGTCGATAC 1640 Query 1214 GGGGATCTACGCC 1226 | || || || || Sbjct 1639 GTGGTTCAACACC 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131844587274876