Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq577692 444 6e-120 seq856283 340 2e-88 seq3816217 309 3e-79 seq3751544 268 1e-66 seq3172301 145 8e-30 seq3654882 143 3e-29 seq3509123 122 9e-23 seq658184 109 6e-19 seq2226574 96.9 4e-15 >seq577692 Length=2825 Score = 444 bits (492), Expect = 6e-120 Identities = 525/708 (74%), Gaps = 2/708 (0%) Strand=Plus/Plus Query 163919 TGGGAACAATTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTC 163978 |||||||| || || | |||||||| || ||| | || || | ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 163979 GGCGTCCTGATGATTCCCTGCCT-GCTGGCAGCGACTACATGTTTCATCATCGCCTTCAT 164037 || | ||||||| |||| ||| ||| | || || | ||||| | | || || | Sbjct 225 GGTATTGTGATGAT-CCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGT 283 Query 164038 CGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTA 164097 | ||| ||||||||||| || || ||||||||||||||||| | ||||| || |||| Sbjct 284 AGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTA 343 Query 164098 TGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 164157 || || ||||||||| | | |||||| | || |||||| || || || ||||||| Sbjct 344 CGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTT 403 Query 164158 CTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCA 164217 || |||||||||||||| |||| | | || |||||||| || ||||| || || | ||| Sbjct 404 TTATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCA 463 Query 164218 ACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACT 164277 | |||| ||||||||||| || ||||| | | || |||||||||||||||||||| Sbjct 464 GTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACT 523 Query 164278 TTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGC 164337 ||||| || | || ||||||||||||||| || || || |||||||| ||||| Sbjct 524 GTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGC 583 Query 164338 AGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCC 164397 |||| || || | | || ||| || |||||||||||||||| ||||||| | || Sbjct 584 TGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACC 643 Query 164398 TCTGGGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCT 164457 ||||| || ||||| || || |||| ||||| || | || || ||||| || | | Sbjct 644 GCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTT 703 Query 164458 CATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGC 164517 |||||||||||||||||||| || ||||| ||||| ||||| || |||| ||| || Sbjct 704 AATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGC 763 Query 164518 AATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCA 164577 ||||||||||| ||||| || ||||| | || ||||| ||||| |||| ||| ||| Sbjct 764 TATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCA 823 Query 164578 GAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGT 164625 ||| ||||| ||||| || ||||||||||| || ||||| || Sbjct 824 AAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 340 bits (376), Expect = 2e-88 Identities = 436/601 (73%), Gaps = 0/601 (0%) Strand=Plus/Minus Query 165151 GGTTCGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTG 165210 |||| |||||||| || |||||||| || | || || ||||| ||||| || ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 165211 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTT 165270 | | || ||||| ||| || ||||| || | ||||| ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 165271 TCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTC 165330 | || || |||||| || |||||||| || |||||||| || || ||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 165331 TTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 165390 | || || || || || || || || | |||| || || || ||| | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 165391 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 165450 |||| || |||| ||||||| | ||||||||||||| | ||||| | ||| |||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 165451 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 165510 | || || || ||||| || ||||| || || ||| || || ||||| ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 165511 GACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCG 165570 | | | || ||||||||||| ||||| || |||||| | || |||||||| || |||| Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 165571 TTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCG 165630 | || || || | ||||| || |||| ||||| |||||||| || || || | Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 165631 GGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGA 165690 | || |||| |||||||| || | || ||| ||||||| ||||| ||||||||||| | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 165691 ATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTC 165750 | ||||| ||||||||||| || || || ||| | || || || | || | ||| |||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 165751 A 165751 | Sbjct 480 A 480 Score = 129 bits (142), Expect = 6e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838 |||||| || ||| | | ||||| ||| || ||||| || || | || ||||| Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898 || |||||||| || |||||||| |||||||| |||||||| ||||||||||| ||| Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958 || || ||| | |||||||| ||||| ||||||||||| | || || |||| |||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTC 241 Query 165959 TATTGGTATCATTGGTCTCGC 165979 || ||| | | ||||| || Sbjct 240 CATCGGTGTAGTAGGTCTAGC 220 >seq3816217 Length=329 Score = 309 bits (342), Expect = 3e-79 Identities = 266/329 (81%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 164435 TTCCAGGCTGAGCACAACATCCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTG 164494 ||||| || || ||||||||||| |||||||||||||||||| | || || || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 164495 TTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGT 164554 || || ||| || ||||| || ||||||||||| |||| |||||||| |||| ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 164555 GAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACC 164614 || |||||||||| || || || ||||| |||||||| || ||||| |||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 164615 TACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTC 164674 |||||||| || || |||||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 164675 AACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTT 164734 |||||| |||||| |||||||||||| | | || ||||| || |||| |||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 164735 ACTGCTCTGGGCGTTAGCACCATGGCATT 164763 || ||| | || || ||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 268 bits (296), Expect = 1e-66 Identities = 228/281 (81%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 163931 TGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTGATG 163990 |||| ||||||||| || ||| |||| || | ||||| || |||||||| || |||||| Sbjct 1 TGTAGCTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATG 60 Query 163991 ATTCCCTGCCTGCTGGCAGCGACTACATGTTTCATCATCGCCTTCATCGGTGCTCCTCCT 164050 || || ||| || | || || | || | ||||||||| || |||| |||||| || Sbjct 61 ATCCCTACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCC 120 Query 164051 GTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATC 164110 |||||||| || || |||||||||||||| |||||||| || |||| || ||||||||| Sbjct 121 GTGGACATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATC 180 Query 164111 ATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGG 164170 ||||||||||| ||| | ||||| || || || ||||||||||||||||||||||| ||| Sbjct 181 ATCTCTGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGG 240 Query 164171 GAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCC 164211 |||||||| || |||| |||||||||||||||||||| || Sbjct 241 GAAGCAGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 145 bits (160), Expect = 8e-30 Identities = 125/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 164279 TCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCA 164338 || ||||| | || |||||||||||||| |||||||| ||| || ||||| || || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 164339 GCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCT 164398 || |||||||| ||| || |||| || |||| |||||||||||||| || | |||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 164399 CTGGGCATCTCTGGAACCTTCAACTACATGTTGGT 164433 ||||| ||||| ||||| ||||||| ||||||||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq3654882 Length=237 Score = 143 bits (158), Expect = 3e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838 |||||| || ||| | | ||||| ||| ||| ||||| || || | || ||||| Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898 ||||||||||| || || ||||| || |||||||| ||||| ||||||||||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958 || |||||| | |||||||| ||||| || ||||| || | || || |||| |||| Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCA 166012 || ||| | | ||||| || | || || ||||||||||| || ||||| || Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACA 3 >seq3509123 Length=199 Score = 122 bits (134), Expect = 9e-23 Identities = 119/151 (79%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 164771 AACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG-GGTCGTGTGCTCAACACCTG 164829 |||||||||||||||||||| ||| | || || ||| ||||| || | |||||||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGA-CTCCAGCGGTCGGGTAGTTAACACCTG 59 Query 164830 GGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCA 164889 ||| || || ||||||| ||| ||||| |||||||| ||||||||||| || ||||| Sbjct 60 GGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCA 119 Query 164890 CAACTTCCCTCTCGACCTTGCTGCTGCTGAG 164920 ||||||||| | || | ||| |||||||| Sbjct 120 CAACTTCCCCTTAGATTTAGCTTCTGCTGAG 150 >seq658184 Length=760 Score = 109 bits (120), Expect = 6e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 165151 GGTTCGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTG 165210 |||| |||||||| || |||||||| || | || || || || || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 165211 GACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTT 165270 | | || ||||| ||| ||| ||||| || | || || ||||| || || ||||| | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 165271 TCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTA 165310 | || || |||||| ||||||||||| || |||||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 >seq2226574 Length=116 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 165668 AGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGG 165727 ||| ||||| |||||||| || || ||||| ||||||||||| || || || ||| | || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 165728 CGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAG 165783 ||| || | || | ||| |||||||||| ||||||||| || || ||| ||||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529992776028240