Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq396905 111 3e-19 seq650275 91.5 3e-13 seq3695667 89.7 1e-12 seq1177105 87.8 4e-12 seq3954917 86.0 1e-11 seq3113445 84.2 4e-11 >seq396905 Length=1799 Score = 111 bits (122), Expect = 3e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| | || | ||| | ||||||||||| || ||||||||||||| Sbjct 1221 CCACCACGAAGGCGCAAAACAATATGGATTGTGCTTTCTTTCTGTATGTTGTAGTCAGAC 1162 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||| ||| || || || | || |||||||| ||||| || ||||| ||| Sbjct 1161 AGGGTTCGGTCATTTTCAAGCTGATCACCAGCAAAGATAAAACGCTGCTGGTCTGGAGGA 1102 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTT 283021 ||||| |||||||| || ||||| ||||| Sbjct 1101 ATACCTTCCTTGTCCTGTATCTTAGCTTT 1073 >seq650275 Length=2042 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || | ||||| ||||| ||| | |||||| || || | Sbjct 990 ACCACCACGCAGACGCCTCAAAAGATGGAACGTTGACCATTTCTCGATGTTATACTCTGA 1049 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || |||||||| || |||||||| | ||| || || || | Sbjct 1050 GAGAGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGGTGCTCTGGTAG 1109 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 ||| |||||| |||||| |||| ||||| || | ||||| ||||| Sbjct 1110 AATGCCCTCCCAGTCTTGAATCTGGGCTTTCACATTCTCGATGGTGTC 1157 >seq3695667 Length=253 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || | || |||||||| | |||| || || |||||||||||||| | Sbjct 128 CCACCGCGAAGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 69 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 || |||||||||||||| || || || ||||||||||||| | || |||||| Sbjct 68 AGTGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCA 15 >seq1177105 Length=100 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 301438 TATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGTGACG 301497 |||||||||||||||||||| || ||||| ||| |||||| || || ||||| || || Sbjct 3 TATATCAACGTCGATCCGGGTACCATGAGTCCGTTTCAACACGGTGAGGTGTTTGTTACT 62 Query 301498 GATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTA 301535 || || || || |||||||| || ||||| || || || Sbjct 63 GAAGACGGGGCAGAAACCGACCTCGATCTAGGTCATTA 100 >seq3954917 Length=783 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 || |||||||| |||||||||||||| || ||||| ||| ||| ||||| || ||||| Sbjct 394 GATCCCTATATTAACGTCGATCCGGGAACTATGAGTCCGTTTCAGCATGGGGAGGTGTTT 335 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACT 301548 || || | ||||| || ||||| ||| | || |||| || || ||| | || ||| Sbjct 334 GTTACCCAAGATGGGGCAGAAACTGATTTAGACTTGGGACATTATGAAAGATTTACT 278 >seq3113445 Length=152 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| || ||||||||||| | || ||| |||||||||| | || || || |||||| Sbjct 2 TCTTTCTGAATGTTGTAGTCTGAGAGAGTGTGGCCATCCTCCAACTGCTTGCCAGCAAAG 61 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 | | ||| || ||||| |||||||||||| ||||||| ||| | || || || | Sbjct 62 GTAAGACGCTGCTGGTCTGGTGGAATACCCTCCCTGTCTTGAATCATGGCCTTCACATTG 121 Query 283029 TCGA 283032 |||| Sbjct 122 TCGA 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 993519197072428