Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq760737 304 1e-77 seq462382 163 3e-35 seq3130084 138 1e-27 seq456579 114 1e-20 seq3830724 111 2e-19 seq1134067 107 2e-18 seq171851 84.2 2e-11 >seq760737 Length=2966 Score = 304 bits (336), Expect = 1e-77 Identities = 605/887 (68%), Gaps = 12/887 (1%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 |||||| || |||||| || || ||||| | | |||| ||||| || | || || || Sbjct 1553 CATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTTC 1494 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 | ||| ||||| |||||||| ||||| || || || | ||| |||||| Sbjct 1493 AATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAACC 1434 Query 23325 TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384 ||||| | ||| | ||||| |||||||| ||||| || ||| | ||| | || Sbjct 1433 CAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTATT 1374 Query 23385 TATACCTATTAGTTT-TACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAG 23443 || || || | ||| | | || || | | | || ||| |||||| || || | Sbjct 1373 CATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATC-TTTTTCGATATCGACTG 1315 Query 23444 CATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACT---TAA 23500 | || || |||| ||| | |||| | ||| | |||||| ||| ||| Sbjct 1314 CGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTAA 1255 Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560 ||| | || | |||||| ||||||| |||||| || ||| ||| ||||| || |||| Sbjct 1254 ACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAA 1195 Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGG 23620 | || | |||||| | || |||| ||||| | ||||||||| ||||| |||||||| Sbjct 1194 AAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCAC 1135 Query 23621 AAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTAC-CAAATGTTGCATTA 23679 |||| ||||| || || ||| ||||| || | | || | | |||||| ||| Sbjct 1134 AAAAAAAAATGCCTTCTACACATGCAAAAGCGATTA-ACCTCTCTGCAAATGAG---TTA 1079 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | | | |||||| | | ||||| ||||||| ||| || || | ||||| Sbjct 1078 TCAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCG 1019 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 || || || || ||| | ||||||| || | ||| | ||||| || ||||||| || Sbjct 1018 ATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAG 959 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||||||||||| | |||||||||||| || ||||||||||| |||||||| ||| | | Sbjct 958 CTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATT 899 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 || | | |||||| || ||||||| | ||| |||||| ||||| | |||| Sbjct 898 TCTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCA 839 Query 23920 CTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT-CATCAGTTGATAATTT 23978 | ||||||||||| | | || || || || ||||||| |||| || | ||||| Sbjct 838 GCATTTGCAAAGAAAGCTAATATGTACTTGATGAA-TGTCTTTTCATCTGTAGTTAATTG 780 Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAA 24038 | ||| || | | ||| |||| |||||||||||||| |||||||||||| ||| Sbjct 779 GTACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTG 720 Query 24039 GGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATA 24085 || ||||||||| ||||| | || || |||||||||||||| Sbjct 719 TGCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATA 673 >seq462382 Length=1181 Score = 163 bits (180), Expect = 3e-35 Identities = 169/221 (76%), Gaps = 18/221 (8%) Strand=Plus/Minus Query 8400 TCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA- 8458 || ||||| ||||| ||||| ||| |||| ||||||||||| |||||||||| |||| Sbjct 1181 TCTGCCTCACGGGTCCAAGCGATTGTCCTCCCTCAGCCTCCCAGGTAGCTGGGACTACAC 1122 Query 8459 --------GGCAAAA------GCCACCACGCCAAGCTAATTTTT-GTATTTTTAGTAGAG 8503 | | | | ||||||| ||| ||||||||||| | ||||||||||| | Sbjct 1121 CACACTGGGACTACACCAGCTGCCACCATGCCTAGCTAATTTTTTGGATTTTTAGTAGTG 1062 Query 8504 AGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCT 8563 | || ||||||| | ||||||||| |||||| || ||| | |||| |||||||| | | Sbjct 1061 ACAGCGTTTCACTGTATTGGCCAGGATGGTCTTGATCTCTTCACCT--TGTGATCCCCTT 1004 Query 8564 GCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCA 8604 |||| ||||||| || |||||||||||||||| ||||||| Sbjct 1003 GCCTTGGCCTCCAAATTTGCTGGGATTACAGGCCTGAGCCA 963 >seq3130084 Length=153 Score = 138 bits (152), Expect = 1e-27 Identities = 123/153 (80%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 8451 GGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGT-ATTTTTAGTAGAGAGAGGG 8509 ||| ||||| | | ||||||| ||| ||||||||||| | | ||| ||||||| ||| Sbjct 153 GGACTACAGTCGCATGCCACCATGCCCAGCTAATTTTTTTTACTTTCTGTAGAGATGGGG 94 Query 8510 TTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCG 8569 |||| ||| |||| | ||||| ||||| ||||| || |||| | |||||||| ||| | Sbjct 93 TTTCGCCACGTTGCCAAGGCTTGTCTCAAACTCTTGGGCTCAAGCCATCCACCTTCCTAG 34 Query 8570 GCCTCCCAAAGTGCTGGGATTACAGGCATGAGC 8602 | |||||||||||||||||||| |||||||||| Sbjct 33 GTCTCCCAAAGTGCTGGGATTATAGGCATGAGC 1 >seq456579 Length=1737 Score = 114 bits (126), Expect = 1e-20 Identities = 410/635 (65%), Gaps = 12/635 (2%) Strand=Plus/Minus Query 23467 ACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGT 23526 |||||||| |||| | || | |||| ||||||||||| || |||||||| ||| Sbjct 1125 ACTTCTTCGGAAGGTTTTTGTTCGATATACGAGAACAATAAACAAGCGAAATCACAGTGT 1066 Query 23527 AGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGT 23586 | | || || | || || | ||| || || || || | || ||||| | || | | Sbjct 1065 AACGCCTCGTCGCGGCTGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATCAGACCCCTT 1006 Query 23587 TTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCA 23646 || || | ||| ||||| || || || ||||||||||||||||| || || || || Sbjct 1005 TTCTTCAACCAGAATATCGCGGCGAACGATCCGGAAAAGAAAATTCCTTCGACGATGGCG 946 Query 23647 AAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAA 23706 || || || || | || | || | || | |||| |||||| | | ||| Sbjct 945 AAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGACTATCATTGATCCATCTCAGGGCCCAG 886 Query 23707 TTAGCCTTCAATTTTACACACTC---AATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTT 23763 | || ||| |||| ||| | | ||| |||||||| ||||| | | | | |||| Sbjct 885 TCGGCTTTC--TTTTTCAC-CGCGGGAATAGTTTCAATCGCTTTGAGCAAATATCGTTTT 829 Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823 || ||| || || ||||| || || | | |||||||| || || || ||| Sbjct 828 TCGCGTGAATCCTGGATGTAGGTATCTATGAGAAGGCCGTACATTTCCGAGTGGATGTTT 769 Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883 || || ||||||||||| ||||| | | ||||| | | || || || || || Sbjct 768 TCCATCATGATCTGAAACCCGTAAAAGAACCGCGCTTCTGGAATCTGGACTTCCCTACAA 709 Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 || | | | || | ||||||| ||| || || || || | || || || || || | Sbjct 708 AACCGTGTCGCCAGATTTTCGACAACGATCCCGTCGCTTCCCGCGAAAAAGGCGAGGATG 649 Query 23944 TATTTTATAAAATGTCTTT---CATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000 | || |||| | | | | ||| |||| | ||| ||||| ||||||| Sbjct 648 TGGGAGATGAAATATTTCTCGCCGTCA-TTGAGA--CTTTCCCAATGGGGTTTATCTTTG 592 Query 24001 GATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAA 24060 | | |||||| ||| | ||||||||| ||| || ||||| |||||| ||| Sbjct 591 GCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCTCCGCTCGCTTGTACATTTTCCAC 532 Query 24061 ATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 | ||| | | |||||| || || || |||||||| Sbjct 531 ACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 23204 TCATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCT 23263 ||||||| ||| | ||||| |||||||| || | | ||||||| ||||| |||| || | Sbjct 1451 TCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAATTGCTCTTCCCTT 1392 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGG 23294 ||| |||||||| |||||||||||||| || Sbjct 1391 CTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq3830724 Length=343 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 |||| ||||| ||||||||||| || | ||||| || | ||| || | ||| || ||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || ||||| ||||| |||||||||||||| ||||| ||||| || || || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 23620 GAAAAGAAAATACCCTCAACA 23640 ||||| || | ||| || ||| Sbjct 320 GAAAAAAATACACCTTCTACA 340 >seq1134067 Length=100 Score = 107 bits (118), Expect = 2e-18 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 8517 ATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCC 8576 ||||||| |||||||||| ||| ||||||||||| |||||||| |||| ||||||| Sbjct 1 ATGTTGGTCAGGCTGGTCATGAATTCCTGACCTCAGATGATCCACTCGCCTTCGCCTCCC 60 Query 8577 AAAGTGCTGGGATTACAGGCATGAGCCACCGC 8608 ||| |||||||||||||| |||||||||| || Sbjct 61 AAACTGCTGGGATTACAGCCATGAGCCACTGC 92 >seq171851 Length=421 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883 || || |||||||| || ||||| || ||| | ||||||| | ||||| || | | | Sbjct 418 TCCATCGCAATCTGGAATCCATAGAAGCATTTGGCTTCAGGAACCTGAACCTCCTGACTA 359 Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 ||||| | | |||||||| || ||||||||||| || || || ||||| ||||| ||| Sbjct 358 AATCTCTCCACCAAATTTTCATTTACAATACCATCGCTGGCTGCGAAGAAGGCAAGTACA 299 Query 23944 T 23944 | Sbjct 298 T 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495620356954800