Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq559689 105 2e-17 seq396905 96.9 8e-15 seq809212 91.5 3e-13 seq650275 86.0 1e-11 seq3148421 84.2 5e-11 seq1104584 84.2 5e-11 >seq559689 Length=1448 Score = 105 bits (116), Expect = 2e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 177960 ACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAA 178019 || || ||||| ||| || |||||||| | |||||||| ||||| |||||||| Sbjct 257 ACTCTTGAGGTTGAACCATCTGACACCATTCAAGACGTCAAAGCTAAGATACAGGACAAG 198 Query 178020 GAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGA 178079 ||||| | ||||| || |||||||| |||||||| || || | || || | |||| Sbjct 197 GAAGGTGTTCCTCCAGAACAGCAACGTCTTATCTTTGCTGGTCAGCAACTTAGATATGGC 138 Query 178080 AGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 || |||| ||||| || | || ||||| |||||||| ||||||||||| Sbjct 137 CAAACCCTTGGTGATTACAATATTCAGAAAGAGTCAACACTACATCTTGTTTT 85 >seq396905 Length=1799 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAA 178005 |||||||||| || | || ||||| ||| || | || || | || ||| | Sbjct 470 CAGGAAAAACAATTCCTCTTGAGGTTGAACCACTTGAGGCTATTGAAAGTGTTAAAGCTA 529 Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 |||| |||||||| ||||| || | ||| || |||||||| ||| |||| || || || | Sbjct 530 AGATACAGGACAAGGAAGGTATTCATCCAGAACAGCAACGTCTTCTCTTTGCTGGTAAGC 589 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 |||| |||||| | || || ||||| ||| | || |||||| | |||||||||| Sbjct 590 AGCTTCGAGATGGCCAAATCCTAGCTGATTACAACATACAGAAAGAAGCCACACTGCATC 649 Query 178126 TTGTTTTG 178133 ||| |||| Sbjct 650 TTGCTTTG 657 >seq809212 Length=835 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAA 178005 |||||||||| || || || | ||| |||||||| || || |||||| | Sbjct 312 CAGGAAAAACTATTACTGCTAAGTTTGAACCATCAGACACTATTGAATGTGTCAAAGCTA 253 Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 || | ||||||| ||||| | ||| || |||||||| || |||| || || || | Sbjct 252 AGGTACAGGACATGGAAGGTGTTCCTGTAGATCAGCAACGTATTGTCTTTGCTGGTAAGC 193 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 |||| |||||||| | || |||| | |||| | | | ||||| ||||||||||||| Sbjct 192 AGCTTGAAGATGGCCGAACCATTGCTGCTTATGGCATACGGAAAGAGTCAACACTGCATC 133 Query 178126 TTGTTTTG 178133 |||| ||| Sbjct 132 TTGTGTTG 125 >seq650275 Length=2042 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||||||||| || ||| ||||||| ||| || || || | || || || Sbjct 1157 GACACCATCGAGAATGTGAAAGCCCAGATTCAAGACTGGGAGGGCATTCTACCAGAGCAC 1098 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || |||||||| || |||||||| || |||||||| | ||||| | || |||||| Sbjct 1097 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGCCGCACTCTCTCAGAGTATAAC 1038 Query 178101 GTCCAAAAAGAATCAACACTGCATCTT 178127 || | ||| ||||| | |||||| Sbjct 1037 ATCGAGAAATGGTCAACGTTCCATCTT 1011 >seq3148421 Length=155 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 ||||||||||| || || || ||||| | || |||||||| || || |||| | Sbjct 132 ACAGGAAAAACAATTACTCTTGAGGTTAACCCATCTGACACCATTGAAAATGTCACAGCT 73 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 ||||| |||||||| ||||| || || || || |||||||| |||||||| || || Sbjct 72 AAGATACAGGACAAGGAAGGTATTCCACCAGAACAGCAACGTCTTATCTTTGCTGG 17 >seq1104584 Length=100 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037 || |||||||| |||| |||||| ||||| ||||||| ||||| | ||||| ||| Sbjct 99 TCTGACACCATTGAGATTGTCAAAGCTAAGATACAGGACATCGAAGGTGTTCCTCCAGAC 40 Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT 178076 |||||||| ||| | || || || |||||||| |||||| Sbjct 39 CAGCAACGTCTTGTGTTTGCTGGTAAACAGCTTGAAGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1142529156560708