Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1757 118 9e-22 seq1554 113 4e-20 >seq1757 Length=74305 Score = 118 bits (130), Expect = 9e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| ||| || || || || |||||||| || || ||||| ||| || || || Sbjct 33022 TGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTCAAGTTGC 33081 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 |||||||| |||| ||||| |||||||| || || ||||||||||||||| || || Sbjct 33082 TTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTG 33141 Query 118656 TGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||| || | |||| ||||| | || | || ||||| | ||| | |||||||| || Sbjct 33142 GCTTTCACATTCTCGATTGTGTCACTTGGT-TCCACCTCAAGGGTGATAGTTTTGCCAGT 33200 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| |||||||| Sbjct 33201 TAGTGTTTTGACAAAGATCTGCAT 33224 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | |||| ||||||||||| || |||||||| || Sbjct 30204 TACCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTG 30263 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||| || || || |||||||| |||| ||||| |||||||| || | Sbjct 30264 ACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGG 30323 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCG 118688 | ||||| || |||||| || ||| ||| || | ||| | ||||| | || | || Sbjct 30324 GGATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGT-TCA 30382 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | ||| | || ||||| || || || || || || || ||||| Sbjct 30383 ACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 30432 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | |||| |||||||| |||||||||||||| ||| Sbjct 25176 TACCACCACGCAGACGCAAGACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGG 25235 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || || |||||||||||| |||| | ||| |||||||| || | Sbjct 25236 ACAATGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGG 25295 Query 118630 GTATGCCCTCCTTGTCTGTAATTTT 118654 | ||||| ||||||||| ||||| Sbjct 25296 GAATGCCTTCCTTGTCTTGGATTTT 25320 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || ||||| | ||| || | |||| || || || ||||| ||||||||||| Sbjct 23149 ACCACCACGTAAACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGA 23208 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||| || || || ||||||||| |||| ||||| |||||||| || || Sbjct 23209 AAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGG 23268 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGA 118689 ||||| ||||||||| || ||| ||| || | ||| | ||||| | || | || | Sbjct 23269 AATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGT-TCAA 23327 Query 118690 CCTCGACGGT 118699 |||| | ||| Sbjct 23328 CCTCAAGGGT 23337 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||| | || | ||| || || || || |||||||| ||| || || || ||| Sbjct 26460 CAACACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGGCCATC 26519 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || || |||||||| |||| ||||| |||||||| || || |||||||||||||| Sbjct 26520 TTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTC 26579 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCG 118704 | || || ||| || | || | |||||| | || | || ||||| | ||| | | Sbjct 26580 TTGGATCTTGGCTTTCACATTCTCAATGGTGTCACTTGGT-TCCACCTCAAGGGTAATGG 26638 Query 118705 TTTTGCC 118711 |||| || Sbjct 26639 TTTTACC 26645 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || |||||||| ||| || || || ||| || || || |||||| Sbjct 31956 GTGGACTCTTTCTGGATGTTGTAGTCGGACAATGTTCGGCCATCTTCAAGTTGCTTTCCA 32015 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 ||| |||| |||||||||||||| || || || || || |||||| Sbjct 32016 GCGAAGATAAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCT 32060 >seq1554 Length=107351 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| ||| || || || || |||||||| || || ||||| ||| || || || Sbjct 8220 TGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGACAATGTGCGGCCATCTTCAAGTTGC 8161 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 |||||||| |||| ||||| |||||||| || || ||||||||||||||| || || Sbjct 8160 TTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTG 8101 Query 118656 TGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||| || | || | ||||| | || | || ||||| | ||| | |||||||| || Sbjct 8100 GCTTTCACATTCTCAATTGTGTCACTTGGT-TCCACCTCAAGGGTGATAGTTTTGCCAGT 8042 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| |||||||| Sbjct 8041 TAGTGTTTTGACAAAGATCTGCAT 8018 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | |||| ||||||||||| || |||||||| || Sbjct 10301 TACCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTG 10242 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||| || || || |||||||| |||| ||||| |||||||| || | Sbjct 10241 ACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGG 10182 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCG 118688 | ||||| || |||||| || ||| ||| || | ||| | ||||| | || | || Sbjct 10181 GGATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGT-TCA 10123 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | ||| | || ||||| || || || || || || || ||||| Sbjct 10122 ACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 10073 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | |||| || || || |||||||||||||| ||| Sbjct 18052 TACCACCACGGAGACGCAAGACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGG 17993 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||| || || |||||||||||| |||| ||||| |||||||| || | Sbjct 17992 ACAATGTGCGGCCATCTTCAAGTTGTTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGG 17933 Query 118630 GTATGCCCTCCTTGTCTGTAATTTT 118654 | ||||| ||||||||| ||||| Sbjct 17932 GAATGCCTTCCTTGTCTTGGATTTT 17908 Score = 98.7 bits (108), Expect = 9e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | |||| || |||||||| ||||||||||| || Sbjct 10073 TACCACCACGGAGACGCAAGACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTG 10014 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||| || || || ||||||||| |||||||||| |||||||| || | Sbjct 10013 ACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGGG 9954 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCG 118688 | ||||| || |||||| || || || || | || | |||||| | || | || Sbjct 9953 GGATGCCTTCTTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTGTCACTTGGT-TCT 9895 Query 118689 ACCTCGACGGTCACCGTTTTGCC 118711 ||||| | ||| | |||||||| Sbjct 9894 ACCTCAAGGGTGATAGTTTTGCC 9872 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||||| || |||||||||||||| || || ||||| ||| || | Sbjct 13176 CAAGATGGAGGGTAGATTCCTTTTGAATGTTGTAGTCTGACAATGTGCGGCCATCTTCAA 13117 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | || ||||||||| |||| | ||| |||||||| || || ||||| ||||||||| | Sbjct 13116 GTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCCTTCCTTGTCTTGGA 13057 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 | || ||| || | || | |||||| | || | || ||||| | ||| | ||||| Sbjct 13056 TCTTGGCTTTCACATTCTCAATGGTGTCACTTGGT-TCAACCTCCAGGGTAATGGTTTTA 12998 Query 118710 CC 118711 || Sbjct 12997 CC 12996 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || |||| | ||| || | |||| || || || ||||| ||||||||||| Sbjct 13424 ACCACCACGTAGACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGA 13365 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||| || || || ||||||||| |||| | ||| |||||||| || || Sbjct 13364 AAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGG 13305 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGA 118689 ||||| || || ||| || || ||| || | ||| | ||||| | || | || | Sbjct 13304 GATGCCTTCTTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTGTCACTTGGT-TCAA 13246 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || ||||| || || || || || || || ||||| Sbjct 13245 CCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 13197 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || |||||||| ||| || || || ||| || || || |||||| Sbjct 9291 GTGGACTCTTTCTGGATGTTGTAGTCGGACAATGTACGGCCATCTTCAAGTTGCTTTCCA 9232 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 ||| |||| |||||||||||||| || || || || || |||||| Sbjct 9231 GCGAAGATAAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCT 9187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433430171933632