Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1757 84.2 1e-11 seq1554 84.2 1e-11 >seq1757 Length=74305 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| |||| ||| | || || | ||||| || || || Sbjct 33033 TTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAA 33092 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 || || || ||||| || ||| | || ||||||||| ||| || ||||| | || Sbjct 33093 GATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGGATC-TTGGCTTTCACAT 33151 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | || | | ||| || || | ||||| |||||||| || || ||||| | Sbjct 33152 TCTCGATTGTGTCACTTGGTTCCACCTCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGA 33211 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 33212 CAAAGATCTGCAT 33224 >seq1554 Length=107351 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| |||| ||| | || || | ||||| || || || Sbjct 8209 TTCCTTCTGGATGTTGTAGTCCGACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAA 8150 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 || || || ||||| || ||| | || ||||||||| ||||| ||||| | || Sbjct 8149 GATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTG-GCTTTCACAT 8091 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | || | | ||| || || | ||||| |||||||| || || ||||| | Sbjct 8090 TCTCAATTGTGTCACTTGGTTCCACCTCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGA 8031 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 8030 CAAAGATCTGCAT 8018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322773951541760