Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq37837 89.7 5e-13 seq21453 89.7 5e-13 >seq37837 Length=14246 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 || ||||||||||| |||||||| ||||||||||| || || ||||||| ||| || || Sbjct 4722 TTGTTGATATTCACCGACTCTCTTCTCAAAGAAATTGGTCTTGCCTTCTAGTGAGATGTT 4781 Query 16003 TTCCATAAAATCAAAAGGATTT 16024 |||||| |||||||| || ||| Sbjct 4782 TTCCATGAAATCAAATGGGTTT 4803 >seq21453 Length=27831 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 || ||||||||||| |||||||| ||||||||||| || || ||||||| ||| || || Sbjct 7121 TTGTTGATATTCACCGACTCTCTTCTCAAAGAAATTGGTCTTGCCTTCTAGTGAGATGTT 7062 Query 16003 TTCCATAAAATCAAAAGGATTT 16024 |||||| |||||||| || ||| Sbjct 7061 TTCCATGAAATCAAATGGGTTT 7040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462074371145600