Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_003390.2 Length=46675 Score E Sequences producing significant alignments: (Bits) Value seq54356 105 2e-18 >seq54356 Length=14911 Score = 105 bits (116), Expect = 2e-18 Identities = 226/331 (68%), Gaps = 10/331 (3%) Strand=Plus/Minus Query 40431 GCTTTCCGAGGCGTTGGCAAATCCTGGATTACAGCTGCCTTCGTCCTCTGGGTGCTCTTC 40490 || ||||| ||||| || ||||| || || | |||| || ||||| ||| || Sbjct 2846 GCATTCCGGGGCGTGGGTAAATCACATATCACCTCGGCCTATGTTGTCTGGCGGCTGCTC 2787 Query 40491 AACGATCCGGACAAGAAGATTATGGTTATCTCAGCCTCAAAGGAAAGGGCGGATAACTTC 40550 || || || |||||| |||||| |||| ||||| ||||| | || ||| | ||| Sbjct 2786 TGTGACCCTGAGCTGAAGATCATGGTTGTCTCGGCCTCCAAGGACCGCGCTGATCAATTC 2727 Query 40551 TCAATCTTTTGCCAGAAACTCATC-CTGGACATCT-CATGGC-TGAATCATCTAGGACCG 40607 || | ||| |||| || ||| ||| | || | |||| | | |||||| ||| Sbjct 2726 TCCACATTTACCCAGCGTCTGATCGCTG---AGCTGCCTGGCCTCGAGCATCTAAAACCC 2670 Query 40608 AAAGACTCGGACCAACGATGGTCCCGGATCTCATTCGACGTTGGGCCCGCGAAGCCCCAC 40667 || | |||||| || ||| |||| |||| || ||||||||||| ||| | Sbjct 2669 AAGGG---GGACCAGAGAAACTCCAAGATCGCATTTGATGTTGGGCCCGCCAAGGCGTCT 2613 Query 40668 CAAGCGCCCTCAGTCAAGTCCGTCGGTATCACGGGCCAGATGACAGGATCACGCGCACAC 40727 || ||||||||||||| || ||||| || || ||||||||||| || || || || | Sbjct 2612 CACTCGCCCTCAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGAT 2553 Query 40728 TTAATGATCTTCGATGACGTCGAAGTTCCTG 40758 | ||||| |||||||| | || ||||| Sbjct 2552 CTGCTGATCGCTGATGACGTTG-AGGTCCTG 2523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149104251094624