Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_004665.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq54356 105 2e-18 >seq54356 Length=14911 Score = 105 bits (116), Expect = 2e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 35222 TCGCCTTCGACGTGGGTCCAGCCAAGCCTGACCACTCGCCCTCTGTGAAGTCTGTAGGTA 35281 |||| || || || || || |||||| | ||||||||||| || || ||||| || | Sbjct 2644 TCGCATTTGATGTTGGGCCCGCCAAGGCGTCTCACTCGCCCTCAGTCAAATCTGTCGGCA 2585 Query 35282 TCACCGGCCAGTTGACTGGTAGCCGTGCTGACATCCTCATTGCGGACGACGTTGAGGTTC 35341 | || |||||| |||| || |||||||| | || || || || ||||||||||| | Sbjct 2584 TTACAGGCCAGATGACGGGCTCTCGTGCTGATCTGCTGATCGCTGATGACGTTGAGGTCC 2525 Query 35342 CCAACAACTCTGCCACTCAGACCGCCCGAGATCACCTCGGAGAGCTGGTGAAGGAGTTCG 35401 |||||| | || || ||| || || | ||||| ||| |||| ||||| || | Sbjct 2524 TGAACAACGCCGCAACCCAGCAAATGCGGGACAAGCTCGGCGAGGTGGTCAAGGAATTTG 2465 Query 35402 ATGCGATCCTGAAGCCGG 35419 | || ||||| ||||||| Sbjct 2464 ACGCCATCCTCAAGCCGG 2447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119319848084192