Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1554 100 3e-16 seq1757 87.8 2e-12 >seq1554 Length=107351 Score = 100 bits (110), Expect = 3e-16 Identities = 136/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | |||||| | || ||||| ||| |||||||| ||| | ||||| ||| Sbjct 9872 GGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTAAG 9931 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 || ||||||||||| || || || ||||| ||| | ||||| | || || || ||| Sbjct 9932 ATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTCATCTTCGCTGGAAAGCAA 9991 Query 26916 CTCGAAGATGATAG--AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATC 26973 || ||||||| | | |||| ||||| |||||||| ||||| || ||| |||||| Sbjct 9992 CTTGAAGATGGCCGCACATTGTCA--GACTACAACATTCAGAAAGAGTCCACTCTCCATC 10049 Query 26974 TGGTCCTG 26981 | ||| || Sbjct 10050 TTGTCTTG 10057 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAA-ACAAAA 26854 || ||| | || ||| | || ||||| ||| |||||| || ||| | || || || ||| Sbjct 17851 GGTAAAACCATAACCCTTGAGGTAGAACCAAGCGACACAATTGAGAATGTAAAGACCAAA 17910 Query 26855 GATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACA 26914 || ||||| ||||| || || || ||||| ||| | || || | || || ||||| Sbjct 17911 -ATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAACA 17969 Query 26915 ACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCT 26974 ||| ||||||| | | | |||||| ||||||||||| ||||| || ||||||| Sbjct 17970 ACTTGAAGATGGCCGCACATTGTCCGACTACAACATTCAAAAGGAATCAACCCTCCATCT 18029 Query 26975 GGTCCTG 26981 ||| || Sbjct 18030 TGTCTTG 18036 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| || | || ||| | || | ||| ||| Sbjct 10073 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 10132 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| |||||| ||||||||||| || || || ||||| Sbjct 10133 GACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 10192 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTATA 26946 ||| | || || | | || || ||||| ||||||| | | |||| ||||| | Sbjct 10193 CAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCA--GACTACA 10250 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| || ||||| |||||| ||||||| ||| || Sbjct 10251 ACATCCAGAAAGAGTCTACTCTCCATCTTGTCTTG 10285 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | |||||| | || ||||| ||| || ||||| ||| | ||||| ||| Sbjct 10749 GGCAAAACTATCACCCTTGAGGTAGAACCAAGTGATACCATTGAGAATGTCAAGGCTAAG 10808 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 || ||||||||||| || || || ||||| ||| | || || | || || || ||| Sbjct 10809 ATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGCAA 10868 Query 26916 CTCGAAGATGATAG--AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATC 26973 || ||||||| | | |||| ||||| ||||| || ||||| || ||| |||||| Sbjct 10869 CTTGAAGATGGCCGTACATTGTCA--GACTACAACATCCAGAAAGAGTCCACTCTCCATC 10926 Query 26974 TGGTCCTG 26981 | ||| || Sbjct 10927 TCGTCTTG 10934 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | |||||| | ||| ||||| ||| ||||| || ||| | || || ||| Sbjct 9122 GGCAAAACTATCACCCTAGAAGTAGAACCAAGTGACACAATTGAGAATGTTAAGGCTAAG 9181 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 || ||||||||||| || || || ||||| || | || || | || || || ||| Sbjct 9182 ATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAGCGTCTTATCTTCGCTGGAAAGCAA 9241 Query 26916 CTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTG 26975 || ||||||| | | | |||||| ||||| || ||||| || ||| | ||||| Sbjct 9242 CTTGAAGATGGCCGTACATTGTCCGACTACAACATCCAGAAAGAGTCCACTCTTCATCTT 9301 Query 26976 GTCCTGAGACTTAGAGGAGG 26995 ||| || | ||| | || || Sbjct 9302 GTCTTGCGTCTTCGTGGTGG 9321 >seq1757 Length=74305 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAA-ACAAAA 26854 || ||| | |||||| | || ||||| ||| ||| || || ||| | || || || ||| Sbjct 25377 GGTAAAACTATCACCCTTGAGGTAGAACCAAGCGATACAATTGAGAATGTAAAGACCAAA 25318 Query 26855 GATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACA 26914 || ||||| ||||| || || || ||||| ||| | | || | || || ||||| Sbjct 25317 -ATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTTTGATCTTCGCTGGAAAACA 25259 Query 26915 ACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCT 26974 ||| ||||||| | | | |||||| ||||||||||| || |||||| ||||||| Sbjct 25258 ACTTGAAGATGGCCGTACATTGTCCGACTACAACATTCAAAAGGAGTCTACTCTCCATCT 25199 Query 26975 GGTCCTG 26981 ||| || Sbjct 25198 TGTCTTG 25192 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | |||||| | || ||||| ||| |||||||| ||| | ||||| ||| Sbjct 29746 GGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTAAG 29687 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 || ||||||||||| || || || ||||| ||| | || || | || || || || Sbjct 29686 ATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGCAG 29627 Query 26916 CTCGAAGATGATAG--AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATC 26973 || ||||||| | | |||| ||||| ||||| || ||||| || ||| |||||| Sbjct 29626 CTTGAAGATGGCCGCACATTGTCA--GACTACAACATCCAGAAAGAGTCCACTCTCCATC 29569 Query 26974 TGGTCCTG 26981 | ||| || Sbjct 29568 TCGTCTTG 29561 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| || | || ||| | || | ||| ||| Sbjct 30432 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 30373 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| |||||| ||||||||||| || || || ||||| Sbjct 30372 GACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 30313 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTATA 26946 ||| | || || | | || || ||||| ||||||| | | |||| ||||| | Sbjct 30312 CAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCA--GACTACA 30255 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| || ||||| |||||| ||||||| ||| || Sbjct 30254 ACATCCAGAAAGAGTCTACTCTCCATCTTGTCTTG 30220 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | |||||| | ||| ||||| ||| ||||| || ||| | || || ||| Sbjct 32125 GGCAAAACTATCACCCTAGAAGTAGAACCAAGTGACACAATTGAGAATGTTAAGGCTAAG 32066 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 || ||||||||||| || || || ||||| || | || || | || || || ||| Sbjct 32065 ATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAGCGTCTTATCTTCGCTGGAAAGCAA 32006 Query 26916 CTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTG 26975 || ||||||| ||| | |||||| ||||| || ||||| || ||| | ||||| Sbjct 32005 CTTGAAGATGGCCGAACATTGTCCGACTACAACATCCAGAAAGAGTCCACTCTTCATCTT 31946 Query 26976 GTCCTGAGACTTAGAGGAGG 26995 ||| || | ||| | || || Sbjct 31945 GTCTTGCGTCTTCGTGGTGG 31926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478209489637120