Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1554 82.4 7e-11 >seq1554 Length=107351 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/188 (70%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 || ||| | |||||| | || || || | | |||||||| ||| | || ||| ||| Sbjct 12996 GGTAAAACCATTACCCTGGAGGTTGAACCAAGTGACACCATTGAGAATGTGAAAGCCAAG 13055 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 || ||||| |||||||| || || ||||| || | |||| | || || |||||| Sbjct 13056 ATCCAAGACAAGGAAGGCATCCCCCCAGATCAGCAACGTTTGATCTTCGCTGGAAAGCAA 13115 Query 24138 CTCGAAGATGACAGAAAC--GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATT 24195 || ||||||| | | | ||||| | || ||||||||||| |||||||| | ||| Sbjct 13116 CTTGAAGATGGCCGCACATTGTCAG--ACTACAACATTCAAAAGGAATCTACCCTCCATC 13173 Query 24196 TAGTGTTA 24203 | || ||| Sbjct 13174 TTGTATTA 13181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429539364692880